Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1624 ATGTATTTTCTGCTTTCTGCTGTTGCTAAAGCTTTTCCCGAAGAAGTTTTCGAGCATATACTTGATATTGTTGCTGTTGTTGGAGAATCAACTATCACACAGATTGACAGTCATTCAAAGCATGTTTTTGAGGATCTTATATCGGCGATTGCTCCTTGTTGGCTGTCTAAGACCGACAATGCGGAAACATTACTAAAGATTTTCATGGATACATTGCCTGAAGTTGTTGAGCATAGAAGATTGTCAATTGTTTTATACTTGTTGAGAACTTTGGGTGAGGATAAAAGCTTGGCTTCTTTGCTTGTCCTTCTTTTCCATTCATTAGTTTCAAGGGAACAAACTACTATCCTTAATATCAAGGTTGCAGATGCATTAACGTTTTATACGAGAGAGTCTTCCTCGCGTGGAAATGATTTAAAAGATCCTTTACTGGCAGTTTTGCGGGTAAGCGATATATTGGATTCCACTACTTATGGTCACCTTGCCTATGTACAGCCCTGTATAACTATTTTGAGGAAACTTAATGGTCAATTCTATGAGGGGTTGGATAATGAAGTCAAGGCTTCTTCAGAGAAGAAATTGTCGAACCCAATGAGGGAAATAAAGGTCCAGAAGCTCGTCCTCAACATCTCTGTCGGTGAGAGTGGAGATCGTCTCACTCGTGCTGCCAAGGTGCTTGAGCAACTCAGTGGCCAAACCCCTGTTTTCTCCAAAGCAAGGTACACTGTCCGATCCTTTGGGATTAGGAGAAACGAAAAGATTGCATGCTATGTTACAGTTAGAGGTGAAAAAGCAATGCAGCTTTTGGAGAGTGGCCTGAAGGTGAAGGAATATGAGCTTCTAAGGCGAAACTTTAGTGATACTGGGTGTTTCGGCTTCGGTATTCAGGAGCATATTGACTTGGGAATCAAGTATGATCCTTCCACTGGCATTTACGGTATGGACTTTTATGTTGTACTGGAACGCCCTGGTTATCGTGTTGGCCGTCGTCGTAGGTGCAAGTCTCGTGTTGGTATTCAGCACCGTGTCACGAAGGATGATGCCATGAAATGGTTTCAGGTTAAGTATGAAGGTGTGATCCTTAACAAGGCCCAAACTATCGTTGGTTAG 1110 0.4216 MYFLLSAVAKAFPEEVFEHILDIVAVVGESTITQIDSHSKHVFEDLISAIAPCWLSKTDNAETLLKIFMDTLPEVVEHRRLSIVLYLLRTLGEDKSLASLLVLLFHSLVSREQTTILNIKVADALTFYTRESSSRGNDLKDPLLAVLRVSDILDSTTYGHLAYVQPCITILRKLNGQFYEGLDNEVKASSEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKDDAMKWFQVKYEGVILNKAQTIVG 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1624 369 ProSitePatterns Ribosomal protein L5 signature. 226 242 IPR020929 GO:0003735|GO:0005840|GO:0006412
Mibi07g1624 369 Gene3D - 188 364 IPR022803 -
Mibi07g1624 369 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 174 363 IPR002132 GO:0003735|GO:0005840|GO:0006412
Mibi07g1624 369 SUPERFAMILY RL5-like 195 360 IPR022803 -
Mibi07g1624 369 FunFam 60S ribosomal protein L11 188 361 - -
Mibi07g1624 369 Pfam Ribosomal protein L5 196 249 IPR031310 -
Mibi07g1624 369 Pfam ribosomal L5P family C-terminus 253 351 IPR031309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1624 Mibi-ChrMibi07 31059151 31067639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1624 189 369 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 95.580 1.49e-128 364