Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1619 ATGGAGGATAAGGCAGAAGGAAAAAATGAAATACAGGATGCACCATCTTCAGTTGTTGCTGTAGGTATCAAGGGTAGCAGGAAAAGCAAAAGTATATTACAGTGGGCACTTAAGAGATTTGTTCCTGAAGGGAAGATCATGTTTAAGCTGATACATGTTCATGCCAGTATAAAAGGAGTACCAACACCAATGGGAAATTTCATCCCTATTTCACAAGTGCGTCCTGATGTAGCAGATGCCTTCAAAAAGGATGTCGAGTGGCAAAAAAGTCAAATGATGTTACCCTATAAAAATATGTGCGATCAGAGAAAGGTGTATGTAGATACAATAGTGATTGAATCTGATGATGTTGCAACTGCAATAGCAGAAGAAATCGCTAAGGATGCTGTGACCAAACTTGTTATTGGAGCATCATCTCGTAGCATATTTTCTAGCAAGCTCAAGGGTATTGCTGCAAAAATATCAGTTTGTACTCCAAGATTTTGCACAGTTTATGCGATTTCCAAAGGAAAGTTGTCTTCTGTACGGCCATCAGATATGAAGATTGATGAGAGCGTTGTAGATGACAGTAGTGAAACCAATGGTTCCACCAGTTCATCAAACCACACTTCCACCTCTCAGTCAGACTCTGTCACAGTTGCTTCATATGGTCCTTCAAGTTCCTCTTTATCGGAGCAGCGATTTCAAGCTCTTTCCTCTTTGAATCAAACCGTCCTAAGTGCAAATCCTAGTTTTATTGAATCTAACCATTCTAGATGTCAGTCCCTAGATATTGGAATTCAGAATAATGTAACAAGTTTGTCTGCTAGAAATTCTAGTGTTGGATATGGTCTCAGTCGGGCTTCTAGTTGCAAAAGCTTATCAGAAACAGAATCTTGTGTTCATGTTCAAAATTCCACCATTGATGTACCAACAGCAACTGAATCACCTTCATCCGTTAGGGAGGAAAATATTACCCTTGAGCTGGAAAAATTGAGGATTGAATTAAGACATGCCCAAGGAATGCATGCAATTGCTCAAAGTGAGAACATTGATGCATCACGAAAGCTGAATGATTTAAATAAGAGACGATCGGACAAATTAATGAAACTCAATGAGATTATTGCTAAGGAAGAGTTGGCAAAACAATCATTAAGGCTAGAGAGAGAGAAATACGAAGCTGCAAAAAGAGAAGCTGATTATCTAAAAGAATCTGCTGAAAGGGAAGCTGCGGAAAGAATAGACATGGAGATAAAAGCTGTTCGTGCTACGCAAGAGAAAGAAAAACTAGAGTCTGCTCTTACCAGTTCGACACCTCAGTACCATAAGTTTACATGGGACGAGATAGTGTCTGCTACCTTATCTTTCTCTGAAGATCTGAGAATTGGAATGGGAGCATATGGTACAGTTTACAAGTGTAATTTACATCATACTGTTGTTGCTGTTAAAGTACTTCACTCTAAAGGGAACAGCAAAAGCAATCAATTCCAACAGGAGCTAGAAATCTTGTCCAGAATTCGTCATCCTAATTTGCTGCTCCTTCTTGGCGCCTGTCCTGATAATGGATGTCTTGTATATGAATACATGGAGAATGGTAGCTTGGAGGACCGGTTATTTAGGAAAAATGGCACAGCCCCAATTCCTTGGTATGAGAGGTACCGGATTGCATGGGAAGTAGCCTCAGGCCTAGCCTTTCTTCACAGATCAAAACCAACGGCCATTGTCCACCGTGATTTAAAACCAGCAAACATTTTGCTTGACAGTAACTTGGTGAGCAAGATTGGTGATATTGGTCTTTCTACCGTGATTGATTCAGATGTCTCCTCTACCATATTCAAGGACACAGAGCCTGTTGGAACCCTTTGCTACATAGATCCTGAGTATCAAAGGAGCGGGTTGTTAACTCCAAAATCCGATGTGTATGCTTTTGGGATGGTGATCTTACAATTATTGACAGCAAAACCAGCTATAGGACTTACTCATGCGGTAGAAACAGCAGTTGATGATGGAAAACTCACAGATATATTGGACCCGGAGGCAGGGAGTTGGCCACTTCAGGAGACAATGGACTTAGCACGATTAGGCCTTAGCTGTACAGAACTCCGTCGTAAAGATCGACCGAATTTAGATGATGTGATTGCCACGTTGGAACAATTGAAAGAAGTTGCTGACAGTGCCCAAAGATCCAGTCTTGGCGTTAAATCAAAACCTCCTAATCATTTTATGTGCCCAATTCTCCAGGATGTGATGGATGATCCCTGTGTTGCTGCGGATGGATATACATACGATCGCAAAGCAATCGAAACATGGCTTCAAGAGAACGACAAATCACCAATGACTAATATGGAACTTTCTCATAAGAATATAATACCTAATTACACACTTCTATCAGCAATTATGGAGTGGAAGTCTGGAGGAAAATGA 2403 0.4066 MEDKAEGKNEIQDAPSSVVAVGIKGSRKSKSILQWALKRFVPEGKIMFKLIHVHASIKGVPTPMGNFIPISQVRPDVADAFKKDVEWQKSQMMLPYKNMCDQRKVYVDTIVIESDDVATAIAEEIAKDAVTKLVIGASSRSIFSSKLKGIAAKISVCTPRFCTVYAISKGKLSSVRPSDMKIDESVVDDSSETNGSTSSSNHTSTSQSDSVTVASYGPSSSSLSEQRFQALSSLNQTVLSANPSFIESNHSRCQSLDIGIQNNVTSLSARNSSVGYGLSRASSCKSLSETESCVHVQNSTIDVPTATESPSSVREENITLELEKLRIELRHAQGMHAIAQSENIDASRKLNDLNKRRSDKLMKLNEIIAKEELAKQSLRLEREKYEAAKREADYLKESAEREAAERIDMEIKAVRATQEKEKLESALTSSTPQYHKFTWDEIVSATLSFSEDLRIGMGAYGTVYKCNLHHTVVAVKVLHSKGNSKSNQFQQELEILSRIRHPNLLLLLGACPDNGCLVYEYMENGSLEDRLFRKNGTAPIPWYERYRIAWEVASGLAFLHRSKPTAIVHRDLKPANILLDSNLVSKIGDIGLSTVIDSDVSSTIFKDTEPVGTLCYIDPEYQRSGLLTPKSDVYAFGMVILQLLTAKPAIGLTHAVETAVDDGKLTDILDPEAGSWPLQETMDLARLGLSCTELRRKDRPNLDDVIATLEQLKEVADSAQRSSLGVKSKPPNHFMCPILQDVMDDPCVAADGYTYDRKAIETWLQENDKSPMTNMELSHKNIIPNYTLLSAIMEWKSGGK 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1619 800 Coils Coil 361 426 - -
Mibi07g1619 800 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 729 799 IPR013083 -
Mibi07g1619 800 CDD RING-Ubox_WDSUB1_like 734 774 - -
Mibi07g1619 800 Gene3D HUPs 10 150 IPR014729 -
Mibi07g1619 800 MobiDBLite consensus disorder prediction 185 218 - -
Mibi07g1619 800 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 148 - -
Mibi07g1619 800 Pfam U-box domain 731 796 IPR003613 GO:0004842|GO:0016567
Mibi07g1619 800 SMART serkin_6 449 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1619 800 CDD STKc_IRAK 455 712 - -
Mibi07g1619 800 Coils Coil 702 722 - -
Mibi07g1619 800 Gene3D Phosphorylase Kinase; domain 1 417 521 - -
Mibi07g1619 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Mibi07g1619 800 SUPERFAMILY RING/U-box 725 796 - -
Mibi07g1619 800 CDD STK_N 18 170 - -
Mibi07g1619 800 SUPERFAMILY Protein kinase-like (PK-like) 429 710 IPR011009 -
Mibi07g1619 800 SMART Ubox_2 733 795 IPR003613 GO:0004842|GO:0016567
Mibi07g1619 800 ProSitePatterns Protein kinases ATP-binding region signature. 455 476 IPR017441 GO:0005524
Mibi07g1619 800 ProSiteProfiles U-box domain profile. 729 800 IPR003613 GO:0004842|GO:0016567
Mibi07g1619 800 PANTHER OS02G0152300 PROTEIN 18 794 - -
Mibi07g1619 800 Gene3D Transferase(Phosphotransferase) domain 1 522 728 - -
Mibi07g1619 800 ProSiteProfiles Protein kinase domain profile. 449 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1619 800 MobiDBLite consensus disorder prediction 189 218 - -
Mibi07g1619 800 Pfam Protein kinase domain 452 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1619 800 Coils Coil 322 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1619 Mibi-ChrMibi07 30913975 30920011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1619 16 797 U-box Gene Family AT4G25160 51.408 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mibi07g1619 Pkinase 3.4e-41 CL0016