Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1608 ATGGCCGATGAAGATTCAAAGCCAACCCTTTCTGTTACAGAGAAAGAAGAATTAGAGCCACCAAAGGTTACAACAGAATCTGATTCAACCACTATAGCATCTGCCTCAGCCGTCGAATCTGACTCGCCGGCGGCGAATACTGAAAACACAAACCAACCGCCTCCGCCGCCGTCGGAATCACCGGCGGAAGAAGCTACTTCGGTGGTAGAAACAGAGCCGCCGCCGCCGTCATCAACCACTGAAGAAAGCGATGTGAAGGATAAAAGTTCAGAGACTAAAGAGGATGATACTGTTGAGGCTCAAGATGAGAGATCGAGTAAGTTGCCTCAGAATCTGGTTTCGTTCAAGGAAGAGAGCAATTTAGTGGCTGATCTTTCAGATTCTCAGAGGAATGCTCTTGATGAGTTGAGGAAACTGGTTCGAGAGGCACTTGATGCTCATCAGTTCGCTTCTTCGGTAACAGTCAAAACGACGTCGTCGTCGTCGTCGGTTTCTACTACTGAAGCCAAAACCCTAGCGGATAAGGAAGCTGCGAAAATTGAAGGAGAGGCTTGTGAATCAGATGCTAGCACGGAGGTGAATCCACCGCCTGAGAATAAAATTGAAGGAAGCTCAGTGAAGGAAGCAGAGGAAGTAGGGAAAGAAGGTTCCGAAGAGCTTGTTTTCATATGGGGGCTTCCTCTGCTTAAGGATGAAAGGAGTGATGTGATTCTGCTTAAGTTTCTTAGAGCTAGGGATTTTAAAGTTAAGGATGCGTTTGCGATGATTAAGAACACAATAAGGTGGAGGAAAGAGTTTAACATTGATGAACTTGTGAATGAAGATCTAGGAGATGATTTGGAGAAAGTGGTGTTCATGCACGGTTATGATAGGGAAGGGCATCCTGTTTGTTATAATGTCTATGGAGAATTTCAGAACAAGGAGTTGTATCAGAAGACTTTCTCTGATGAAGAGAAACGAGTCAAGTTCTTACGATGGAGGATACAGTTTTTGGAGAGGAGTATTAGGAAGCTTGATTTTACTCCTGGTGGTGTCAATACCATTTTCCAAGTTAATGACCTTAAAAATTCTCCTGGTCCTGCCAAGCGGGAGCTTAGAATTGCTACCAAACAAGCCTTGCAATTGCTTCAGGACAATTATCCCGAGTTTGTTGCCAAACAGGTTTTTATCAATGTGCCATGGTGGTATCTTGCATTCTATACTATGATCAGTCCATTCTTGACCCAGAGGACCAAAAGCAAATTTGTTTTTGCAGGCCCATCAAAGTCCGCTGAAACACTTTTCAAGTACATTTCTCCTGAGCAAGTGCCAATTCAATATGGTGGCCTAAGTGTTGATTTATGCGACTGCAACCCAGAATTCAGCATGTCTGATCCAGTCACGGAGGTACCTATAAAACCAACCACCAAGCAAACTGTGGAAATCATTATATATGAGAAATGCATTATTGTGTGGGAGCTGCGAGTAGTGGGCTGGGAGGTCAGTTATAGTGCGGAATTCAAACCTGATGCAAAAGATGGATATACAGTTATCATACAAAAGGCCACAAAGATGTCCCCAACTGATGAGCCCGTGGTTTCCAATAGCTTTAAAGTTGGTGAATTGGGCAAGATATTGCTTACCATTGACAATTCCACATTGAAAAGGAAGAGGCTTCTATACAGGTTCAAGATCAAACCTCTCAGTGATTGA 1692 0.4374 MADEDSKPTLSVTEKEELEPPKVTTESDSTTIASASAVESDSPAANTENTNQPPPPPSESPAEEATSVVETEPPPPSSTTEESDVKDKSSETKEDDTVEAQDERSSKLPQNLVSFKEESNLVADLSDSQRNALDELRKLVREALDAHQFASSVTVKTTSSSSSVSTTEAKTLADKEAAKIEGEACESDASTEVNPPPENKIEGSSVKEAEEVGKEGSEELVFIWGLPLLKDERSDVILLKFLRARDFKVKDAFAMIKNTIRWRKEFNIDELVNEDLGDDLEKVVFMHGYDREGHPVCYNVYGEFQNKELYQKTFSDEEKRVKFLRWRIQFLERSIRKLDFTPGGVNTIFQVNDLKNSPGPAKRELRIATKQALQLLQDNYPEFVAKQVFINVPWWYLAFYTMISPFLTQRTKSKFVFAGPSKSAETLFKYISPEQVPIQYGGLSVDLCDCNPEFSMSDPVTEVPIKPTTKQTVEIIIYEKCIIVWELRVVGWEVSYSAEFKPDAKDGYTVIIQKATKMSPTDEPVVSNSFKVGELGKILLTIDNSTLKRKRLLYRFKIKPLSD 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1608 563 PRINTS Cellular retinaldehyde-binding protein signature 237 259 - -
Mibi07g1608 563 PRINTS Cellular retinaldehyde-binding protein signature 400 419 - -
Mibi07g1608 563 Pfam CRAL/TRIO domain 283 442 IPR001251 -
Mibi07g1608 563 MobiDBLite consensus disorder prediction 81 103 - -
Mibi07g1608 563 MobiDBLite consensus disorder prediction 24 48 - -
Mibi07g1608 563 MobiDBLite consensus disorder prediction 1 23 - -
Mibi07g1608 563 MobiDBLite consensus disorder prediction 1 114 - -
Mibi07g1608 563 Gene3D GOLD domain 460 558 - -
Mibi07g1608 563 Coils Coil 122 142 - -
Mibi07g1608 563 Gene3D - 152 459 IPR036865 -
Mibi07g1608 563 SMART sec14_4 278 445 IPR001251 -
Mibi07g1608 563 MobiDBLite consensus disorder prediction 182 205 - -
Mibi07g1608 563 PANTHER PATELLIN-1 80 560 IPR044834 GO:0008289
Mibi07g1608 563 CDD SEC14 279 443 IPR001251 -
Mibi07g1608 563 SMART CRAL_TRIO_N_2 234 259 IPR011074 -
Mibi07g1608 563 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 273 448 IPR001251 -
Mibi07g1608 563 Pfam CRAL/TRIO, N-terminal domain 224 258 IPR011074 -
Mibi07g1608 563 ProSiteProfiles GOLD domain profile. 453 558 IPR009038 -
Mibi07g1608 563 SUPERFAMILY CRAL/TRIO N-terminal domain 120 274 IPR036273 -
Mibi07g1608 563 FunFam SEC14 cytosolic factor family protein 278 458 - -
Mibi07g1608 563 SUPERFAMILY CRAL/TRIO domain 283 452 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1608 Mibi-ChrMibi07 30555999 30557973 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1608 238 437 Acyl Lipid Metabolism Gene Families AT1G55840 26.540 1.83e-10 60.5