Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1600 ATGGAGTTTGGGATTTCAAGTTCTACATTTTTCTATATCATCATATTTGGATGCTTCGCTTTGAACGTTATCATGGAGTATGGATCCAGTGCTCAACTCATACCTGAAGATGAAGTGAAGGTTCTAAAAACAATATCATCGAAGATTGATAACTTGAATTGGAATGTGACCCCAAGTTCTTGTATCGACGGAGGCTTCAAAAATAGTATAATCAGTAATGGCATCATAAGGAATGTATCGTGCGATTGCAGTTTCTCAAGCGGAAAGGTTTGTCACGTTACAAATATCCATATGACGGGCCTCAATCTGTCTGGGATTTTACCAAGTGAATTTGGGTTCCTTATCCATCTGCAAAAACTCGATTTGTCTTTCAATTGTCTGAATGGATCAATCCCAAGGAGCTTTTCTAGACTCCCTCTTGTTTCATTATATCTTACGGGAAACCCGATCAGTGGTCCAATTCCAAATGAAATTGGTCAAATTACAACTTTGGAGGAGTTAGAATTGAGAGATAATATGTTAGAAGGAGCTCTTCCTTCTAACCTTGGAAATTTGAAACAGTTACGCAGATTGGATCTTTCTGGAAATAATTTCTCAGAGACAGTACCTGAAAGTTTGGGCAATCTAAAGAACCTAGAAACTTTTTCATTATATGGGAGCAATATAAAAGGAAAATTGCCCAATTTTATTGGGAATTGGACCCATCTGAATAGACTCTATTTAAGAGGTAACCCTATGGAAGGCCCCATTCCTACAACTATATCTCAATTAACAAATTTGACCGTGTTGATAATATCTGATTTGCATGGATCGGCGACAATGAGATTTCCTAATCTAGAGAATTTGACCTCTTTGACACTCCTGGTGTTGAAAAATTGCTCCATCCATGATTCCATTCCCAATTACATTGGTCAAATGGAAAACTTATCTACTCTACATACTTGCCTGAAAAGGGGACTTCCTTGTGGAGGAAAGCCCAAGTATATGATTTTTGATGAGGTTGTCATCACTACATATGCAGATCATTCATTATTCATAAATTGTGGGGGACCTGCAATTGAATATGAGGGGAATAAATATGAAGAAGACACTAATCCTGGAGGCATCTCATTCTATTTTGCTAGTGGTGATAAATGGGCTTATAGCAGCACAGGAATATACTTAGAAAGATCTGATAATAATTACATAGCAACAAACAGATTTTCTCTCAAGATTACTGATCCTGACTTCTACCAAACAGCTCGTCTATCCCCTTTGTCTCTCAAGTACTATGGCCTCTGTATGATTAATGGAAATTACAACGTTAAACTACACTTTGCTGAGATTATGTATTCTCATGACCAAAATTTCAGCAGCCTGGGAAGCCGCATATTTGATGTTTCAATTCAAGGTGTATTATCAAATGATGTTGCCATAGCTGTGAAGCAGCTTTCTTCAAAATCAAAGCAAGGAAATCGTGAATTTGTTAATGAAGTTGGAATGATATCTGCTTTGCAACACTCAAACCTTGTTAAGCTTTATGGTTGTTGTGTTGACGGAAACCAATTGTTGCTGGCCTATGTTCTTCAAAAGCAAGGAAACCTTCTTGAGTTGGTAGATCCAAATCTTGGTTCAAACTACTCCTCACATGAAGCCATGAGAATGTTGGAGGTGGCACTCCTATGCACTAACCCATCTCCATCTCTGAGACCATCCATGTCTTCTGTTGTTTGCATGCTTGAAGGAAAATTGTCGATCCAAGCTCCGGTAATCAAGCGTAGGGAGAGTGATTGGGATGCAAGATTCAAGCCATTTGAGATGCAATCCCCTCAAGATACCCTTAGTCAAATCTTTAATTCTTCTATAAAATCACGCCAAAGTGAGGAGCAAGGATTTGCTGCAATGGATAGTCCATCGACATCACAAGATGGTATAGTCGAATCTTAG 1926 0.3842 MEFGISSSTFFYIIIFGCFALNVIMEYGSSAQLIPEDEVKVLKTISSKIDNLNWNVTPSSCIDGGFKNSIISNGIIRNVSCDCSFSSGKVCHVTNIHMTGLNLSGILPSEFGFLIHLQKLDLSFNCLNGSIPRSFSRLPLVSLYLTGNPISGPIPNEIGQITTLEELELRDNMLEGALPSNLGNLKQLRRLDLSGNNFSETVPESLGNLKNLETFSLYGSNIKGKLPNFIGNWTHLNRLYLRGNPMEGPIPTTISQLTNLTVLIISDLHGSATMRFPNLENLTSLTLLVLKNCSIHDSIPNYIGQMENLSTLHTCLKRGLPCGGKPKYMIFDEVVITTYADHSLFINCGGPAIEYEGNKYEEDTNPGGISFYFASGDKWAYSSTGIYLERSDNNYIATNRFSLKITDPDFYQTARLSPLSLKYYGLCMINGNYNVKLHFAEIMYSHDQNFSSLGSRIFDVSIQGVLSNDVAIAVKQLSSKSKQGNREFVNEVGMISALQHSNLVKLYGCCVDGNQLLLAYVLQKQGNLLELVDPNLGSNYSSHEAMRMLEVALLCTNPSPSLRPSMSSVVCMLEGKLSIQAPVIKRRESDWDARFKPFEMQSPQDTLSQIFNSSIKSRQSEEQGFAAMDSPSTSQDGIVES 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1600 641 FunFam Leucine-rich repeat receptor protein kinase EMS1 154 246 - -
Mibi07g1600 641 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 464 520 - -
Mibi07g1600 641 Gene3D Transferase(Phosphotransferase) domain 1 507 596 - -
Mibi07g1600 641 SUPERFAMILY L domain-like 79 313 - -
Mibi07g1600 641 Pfam Leucine rich repeat 92 150 IPR001611 GO:0005515
Mibi07g1600 641 Pfam Leucine Rich Repeat 187 209 IPR001611 GO:0005515
Mibi07g1600 641 Gene3D Ribonuclease Inhibitor 40 159 IPR032675 -
Mibi07g1600 641 MobiDBLite consensus disorder prediction 616 641 - -
Mibi07g1600 641 Gene3D - 341 497 - -
Mibi07g1600 641 Gene3D Ribonuclease Inhibitor 254 318 IPR032675 -
Mibi07g1600 641 SMART LRR_typ_2 282 306 IPR003591 -
Mibi07g1600 641 SMART LRR_typ_2 114 138 IPR003591 -
Mibi07g1600 641 SMART LRR_typ_2 185 209 IPR003591 -
Mibi07g1600 641 Pfam Protein tyrosine and serine/threonine kinase 467 546 IPR001245 GO:0004672|GO:0006468
Mibi07g1600 641 Gene3D Ribonuclease Inhibitor 160 253 IPR032675 -
Mibi07g1600 641 Pfam Malectin domain 344 471 IPR021720 -
Mibi07g1600 641 SUPERFAMILY Protein kinase-like (PK-like) 450 536 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1600 Mibi-ChrMibi07 30304254 30316991 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1600 519 631 Receptor kinase-like Gene Family AT1G53430 54.701 1.60e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi07g1600 Malectin 4.4e-22 CL0202