Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1593 ATGAATTGGAATGTAACCCCACGTTCTTGTATTGATGACGGCTTCAAAAATAGTGGCACAATAAGGAATGTAACATGCAATTGCACTTTCTCAAGCGGAAAAGCTTGCCATGTTACCAATATTCATATGTCGGGTCTCAATCTATCTGGATTATTACCTAGTGAATTTGGATCCCTTGCCCATCTGCAAGGACTTGATTTGACTCGCAATTACCTAAACGGATCGATTCCGAGGAGCTTTGCTAGACTTCCTCTTGTTTCATTACACCTTTCAGGCAATCCAATTAGTGGTTCAATTCCAGAGGAAATTGGTGAAATTACAACTTTGGAGGAGCTACATTTGAAAGATACTCTATTAGGAGGAAGTCTTCCTTCTAGTCTCGGAAAATTGAGGCAGTTACGCGTATTGCTTCTTTCTGGAAATAATTTCTCAGGAACAATACCCGAAAGTTTTGGTAATCTGAAAAATCTAGGAATTATTTCATTAGATGGGAACAATATCACAGGAAAATTTCCAAATTTTATGGGGAATTGGACCCAACTTTATAGACTGTACATACAAGGGACGTCTTTGGAAGGCCCCATTCCTCCAATTATATCACAATTAACAAATTTGAGTCTGCTGATGATATCTGATTTGCACGGACCAGCGACAATGAGGTTTCCTAATTTGGAGAATTTGACATTGTTGAATTCATTGGTGTTGAGAAATTGTTCCATCCATGATTCCATTCCTAATTACGTTGGTAAAATGGAAAATTTATCTGCTCTAGATCTAAGCTTCAACAAGTTGATTGGTGAAATCCCAAACAATATAAGTCACTTGACGAACCTAAAGTACATGTTTCTAACTGAAAATTCTCTAAGCGGGAGAATTCCTGAATGGATACTGCAGCGCCAAGATGATTATTTTGATCTATCCTACAACAATTTTTCGGAGACTTCCGCTACTGCTTGTCAGTACAATAATATAAATTTAGCTTCGAGCCTATCATCTTCAGCAAACACCTCACATAATTGCCTGAAAAATGGCCTTCCTTGCGGAGGAAAACCAAAATATCATTCATTGTTCATAAATTGTGGAGGACCAGAAATTGAATATGAGGGAAATAAATATGAAGAAGACACGAATCCTGGGAGTATCACATTCTTTTATCTTAGTGAGGATAAATGGGCTTATAGCAGCACAGGAGTAGTATACTCCAAAAAATATGATAATAATTACATAGCAACAAACAGGTATTCCCTCAACATTACTGGCCCAGAATTCTACCAAACAGCTCGGTTTTCTCCTTTGTCTCTGAAATATCATGGCCTCTGCATGATTAATGGAAATTACAACGTCAAGCTATATTTTGCTGAGATTATGTATTCTCATGACCAAAATTTCAGCAGCCTTGGAAGTCGTATATTTGCTGTTTCAATTCAAGGTAGGCAATATTTGAGTGATTTCAATATTATGAAGGAAGCTAATGGCACTGGTAAGGGCATAGTTAAGGACTTTAACGTTGATGTTGATAATAACACATTGGAGATTCATTTATATTGGGCTAGTGGGAAAGGAACTACCTCTGTTCCTGATTATGGTACATTTGGGCCTCTTATATCTGCTATTTCAGTTACTCCAAATTTCAAAATTCCTTCAGAAAGGCTTTCTACTGGAGCTATTGCTGGAATTGTTGTTGGATTATGCGTGTTCCTCATACTAATAATATTTGTCCTTCGAAAGATGGGTTTCCTAGGTGGCAAAGATGCAAAACAGAAAGAACTTCAGGATCTGAAAACGGGTTATTTCTCTTTAAAACAAATCAAAGACGCCACTAATGATTTTGCCCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTGTACAAGGGTGTACTATCAGATGGTGTTGTTATAGCTGTCAAGCAGCTATCCTCCAAATCAAAACAAGGAAATCGTGAATTTGTTAACGAAATTGGAATGATATCCGCTTTGCAACACCCAAACCTTGTAAAACTCTATGGCTGTTGCGTTGAAGGAAACCAGTTGTTGCTGATATATGAGTATATGGAGAACAATAGTCTCGCTGGTGCTCTCTTTGGTGGCCGAGGACCAAAAATACACTTGAACTGGCTTACAAGAATGAAGATATGTGTAGGGATAGCAAAAGGATTAGCTTATCTTCATGAGGAATCAATTTTGAAAATTGTGCATAGGGATATTAAAGCAACAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATCTCAGACTTTGGCTTAGCCAAACTTGATGAAGATGGGAGTACTCATATTAGCACAAGAGTAGCGGGAACAATTGGTTATATGGCACCTGAATATGCAATGCGAGGATACTTAACTCACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCTTTAGAAATTGTCAGCGGAAAAAGCAACACAAGCTATAGGCCAAAAGAGGAGTTTTTTTATCTTCTTGATTGGGCATATGTTCTTCAAGAGCAAAGAAACCTTCTTGAGCTAGTGGATCCAAGTCTTGATTCAAACTACTCCTTACAAGAAGCCATGAGAATGCTGGAGGTGGTCCTTCTATGCACTAACCCATCTCCAACTCTAAGACCATCCATGTCCTCTGTTGTTTTCATGCTTGAAGGAAAGTTGCCAATCCAAGCGCCAATAATGAAACCCCAAGAGGGTGGCCGAGATGCGAGACTGAAAGCCTTAAATATACTATCATCTCAAGATAGCCATAGCCAAACCTTTAATTCCTCTACGATATCACATGAAAATGTGGAGCAAAGAGATGAAGCAATGGATGGCCCTCCATTACAAGACAACCATAGCCAAACCTTAGCCTTTTACTCTGCTTTCTCACATGAAAGGATGGAGCAGAGTAAATATTTCTCTTCATCTAATATGTTCTTCTAA 2922 0.383 MNWNVTPRSCIDDGFKNSGTIRNVTCNCTFSSGKACHVTNIHMSGLNLSGLLPSEFGSLAHLQGLDLTRNYLNGSIPRSFARLPLVSLHLSGNPISGSIPEEIGEITTLEELHLKDTLLGGSLPSSLGKLRQLRVLLLSGNNFSGTIPESFGNLKNLGIISLDGNNITGKFPNFMGNWTQLYRLYIQGTSLEGPIPPIISQLTNLSLLMISDLHGPATMRFPNLENLTLLNSLVLRNCSIHDSIPNYVGKMENLSALDLSFNKLIGEIPNNISHLTNLKYMFLTENSLSGRIPEWILQRQDDYFDLSYNNFSETSATACQYNNINLASSLSSSANTSHNCLKNGLPCGGKPKYHSLFINCGGPEIEYEGNKYEEDTNPGSITFFYLSEDKWAYSSTGVVYSKKYDNNYIATNRYSLNITGPEFYQTARFSPLSLKYHGLCMINGNYNVKLYFAEIMYSHDQNFSSLGSRIFAVSIQGRQYLSDFNIMKEANGTGKGIVKDFNVDVDNNTLEIHLYWASGKGTTSVPDYGTFGPLISAISVTPNFKIPSERLSTGAIAGIVVGLCVFLILIIFVLRKMGFLGGKDAKQKELQDLKTGYFSLKQIKDATNDFAPENKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLLLIYEYMENNSLAGALFGGRGPKIHLNWLTRMKICVGIAKGLAYLHEESILKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDGSTHISTRVAGTIGYMAPEYAMRGYLTHKADVYSFGVVALEIVSGKSNTSYRPKEEFFYLLDWAYVLQEQRNLLELVDPSLDSNYSLQEAMRMLEVVLLCTNPSPTLRPSMSSVVFMLEGKLPIQAPIMKPQEGGRDARLKALNILSSQDSHSQTFNSSTISHENVEQRDEAMDGPPLQDNHSQTLAFYSAFSHERMEQSKYFSSSNMFF 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1593 973 SMART serkin_6 610 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1593 973 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 581 685 - -
Mibi07g1593 973 Pfam Protein tyrosine and serine/threonine kinase 613 878 IPR001245 GO:0004672|GO:0006468
Mibi07g1593 973 SUPERFAMILY Protein kinase-like (PK-like) 594 882 IPR011009 -
Mibi07g1593 973 MobiDBLite consensus disorder prediction 913 943 - -
Mibi07g1593 973 FunFam Leucine-rich repeat receptor protein kinase EMS1 52 150 - -
Mibi07g1593 973 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 915 - -
Mibi07g1593 973 Gene3D Ribonuclease Inhibitor 218 332 IPR032675 -
Mibi07g1593 973 CDD STKc_IRAK 616 883 - -
Mibi07g1593 973 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Mibi07g1593 973 SUPERFAMILY L domain-like 21 297 - -
Mibi07g1593 973 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 353 543 - -
Mibi07g1593 973 Pfam Leucine rich repeat 131 191 IPR001611 GO:0005515
Mibi07g1593 973 Pfam Leucine rich repeat 37 95 IPR001611 GO:0005515
Mibi07g1593 973 Gene3D - 354 543 - -
Mibi07g1593 973 Gene3D Phosphorylase Kinase; domain 1 579 685 - -
Mibi07g1593 973 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 221 314 - -
Mibi07g1593 973 Pfam Malectin domain 356 538 IPR021720 -
Mibi07g1593 973 Gene3D Ribonuclease Inhibitor 111 217 IPR032675 -
Mibi07g1593 973 Gene3D Ribonuclease Inhibitor 1 108 IPR032675 -
Mibi07g1593 973 ProSiteProfiles Protein kinase domain profile. 610 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1593 973 FunFam Putative LRR receptor-like serine/threonine-protein kinase 686 893 - -
Mibi07g1593 973 Gene3D Transferase(Phosphotransferase) domain 1 686 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1593 Mibi-ChrMibi07 30088050 30099480 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1593 2 947 Receptor kinase-like Gene Family AT1G53430 56.785 0.0 1048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi07g1593 PK_Tyr_Ser-Thr 1e-49 CL0016