Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1566 ATGGATGCTTCATCCAGTACATGTGAGATAGTGGAATCAAGAGAAGAAAATATTTCTGAATTCAGAATGTACGAAAAAGCTGAGAGTAGTTGTGCCCACAGAGCAGGGAAAAAGTATTCTGTAGAGGATGATATTGATCGTCTCTTCCAAGCTATTGACTTAAAAAATTCAGCCAGAGGTTCAAGTACACCATATTCTCAAAAGAGTGCTCTTAAAAGGCCAATTAAAGTCAGTTCATCTCAGGCATCAGGAATTGGGATTGCAGAGCCTGTAAGTTTAAAGCAAGCACTTAGAGGACTTTGCATATCTCAGGCATCAGAGATGGCTGCTTTGAAGCGACTATCAAAGCCGTCCAGTTTGTCTAGAGCATCTGAGGCGGGAACTATTAAAAAGCTTTATTCAGCAGTGGTAGATGAGGGGAAAGGAAACTTGGTGGAAATCTCCCTTGTGCCTGAGATATCTGTACCCTCTGGTAAAATTCCTATGGAAGATAAGTCAAGTTCAAGTGCTGATCATTCTACTCATTTTGTTGATGTAACAAACCCAAAAGCAGTCACAACCAGGGTAGCATCCCGGGATCAGATTGTTCCTCTTCAATCAGGTGAAATTGAGCATTCAGTCACACTCGCTGGAAAACCGGTAGTTCCAAATCTGCCCACAATTGATTATGAAAGTGAGCAAGTATCTGAGGTTAAGATTGTTTCTGCTTCCTCAAGCAAAGCTTCTCACTGTTCTATAATGTTTGATAAGGGACAGCAAGTGGAGTTACATTCAGAGGCTAATCAACCAAGCTCTAGTACGAGCAGTGGAGGGGAGAAATCCACAAGCAGTACTACATGTTTGTCAAAGCCAATGTTCAGGAACATGAGCTTCCTTAGGAGAAAAGTAAAGCAAGAATCATGTTCAATCTCAAGTGGCTCTACACTATGTACTAGAAAAGTTGACAGTGACTTGGATCCTAGTATGAGTAACTTGAACAAGGAGATTGGTAATGATAATTTGAAGCAGGAAATAAAAGAAAATGGTAAATTATCTCCAAGTAGTTCAAATCATAGTGTTGAAGTAAATTCAAATAATGTGGGTGCAGATTCAATGAAAACCGGTTTCAGTATGAATTGCAGTAAGAAATCTAAATTTCTAGCGACAAAATTTGATGGAAAATCAAGATCAAAAGAAAAGGGTGAATTTTCCCAAAGCTCAAAAAGCAGCATTGGTGAGTATAGTAGTAGTACAACAACAAGCATAAGTGAAGAGAGTAATCTGAGTGGCTCTAGTCGCAGTGGCCACAGGCCTCACATGTCGAAACACTTGAGATGGGAAGCTGTTCGTGCTGTTCAGTCACAGAATGGGAACTTAAGTTTGAAACATTTCAAGCTGCTCAGGAGGCTTGGTTGTGGGGACATTGGAACTGTTTATCTTGCAGAACTAATTGGAACAAGCTGTCTTTTTGCTTTGAAAGTGATGGATAATGAATTTTTGGCCAACCGAAAGAAAATTTTTAGGGCCCAAACTGAGAGAGAGATCCTGCAGATGCTGGATCATCCTTTTCTTCCTACGCTTTATGCCTATGTTACAACTGATAAGCTCTCCTGCTTGGTTATGGAGTATTGCCCAGGTGGAGATCTACATGTGCTGCGCCAGAGGCAACCATATAGGAGTTTCTCAGAACAAGCAACCAGGTTTTATGTTGCTGAAGTTCTTCTTGCCGTGGAGTATTTGCACATGCTAGGAGTCATATATCGAGACCTGAAGCCTGAAAATATCCTTGTTCGAGAAGATGGCCATATTATGTTGACAGATTTTGACTTATCTCTTAGATGTTCTGTGAATCCAACGTTACTCAAGTCACATTCGCCGGATGTGGATTCATCAAAGAAGATGTCCAGTCCCTGTGCAGAGGCTAGTTGCATACACCCTTTTTGTCTACAACCTGATTGGCAAGTATCCTGTTTCACTCCTATTCTTTTATCTGCCGGAGCAAAATCTCGAAAGATGAAGTCTGAAGCTGCCCATGTTGGTTCCCTGCCACAACTTGTCGTTGAGCCAACCAGTGCCCGCTCTAACTCTTTCGTTGGTACCTATGAATACCTTGCTCCAGAGATCATCAAAGGCGAGGGCCATGGGAGTGCTGTGGATTGGTGGACTTTTGGTATATTTTTGTTTGAGCTTTTATATGGAAAGACTCCCTTCAAAGGAGCTGGAAATGAGGAGACATTATCCAATGTTGTGTCACAGAGCCTTAAGTTCCCAGATGCTCCTATTGTCAGTTTTCATGCAAGGGATCTGATACGAGGGTTGTTGATAAAAGACCCGGAAAACCGGTTGGGTTCCGTGAAAGGCGCTGCAGAGATAAAACAACACCCTTTCTTTGAAGGCCTAAACTGGGCTCTGATAAGATGTGCAGCACCACCTGAGCTGCCCAAGTTTCGTGATTTTGGAAGCTGTGTTCCATCTATGGCTTCACAGAAGGAGAATGCGAATGATTTAGAAGTTACCGAAGATTGTGAGGAGTTTGAGCTGTTTTAG 2526 0.42 MDASSSTCEIVESREENISEFRMYEKAESSCAHRAGKKYSVEDDIDRLFQAIDLKNSARGSSTPYSQKSALKRPIKVSSSQASGIGIAEPVSLKQALRGLCISQASEMAALKRLSKPSSLSRASEAGTIKKLYSAVVDEGKGNLVEISLVPEISVPSGKIPMEDKSSSSADHSTHFVDVTNPKAVTTRVASRDQIVPLQSGEIEHSVTLAGKPVVPNLPTIDYESEQVSEVKIVSASSSKASHCSIMFDKGQQVELHSEANQPSSSTSSGGEKSTSSTTCLSKPMFRNMSFLRRKVKQESCSISSGSTLCTRKVDSDLDPSMSNLNKEIGNDNLKQEIKENGKLSPSSSNHSVEVNSNNVGADSMKTGFSMNCSKKSKFLATKFDGKSRSKEKGEFSQSSKSSIGEYSSSTTTSISEESNLSGSSRSGHRPHMSKHLRWEAVRAVQSQNGNLSLKHFKLLRRLGCGDIGTVYLAELIGTSCLFALKVMDNEFLANRKKIFRAQTEREILQMLDHPFLPTLYAYVTTDKLSCLVMEYCPGGDLHVLRQRQPYRSFSEQATRFYVAEVLLAVEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVNPTLLKSHSPDVDSSKKMSSPCAEASCIHPFCLQPDWQVSCFTPILLSAGAKSRKMKSEAAHVGSLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGKTPFKGAGNEETLSNVVSQSLKFPDAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGSCVPSMASQKENANDLEVTEDCEEFELF 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1566 841 Gene3D Phosphorylase Kinase; domain 1 455 536 - -
Mibi07g1566 841 MobiDBLite consensus disorder prediction 340 367 - -
Mibi07g1566 841 CDD STKc_phototropin_like 455 813 - -
Mibi07g1566 841 ProSiteProfiles Protein kinase domain profile. 457 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1566 841 MobiDBLite consensus disorder prediction 312 331 - -
Mibi07g1566 841 FunFam serine/threonine-protein kinase D6PK-like 541 608 - -
Mibi07g1566 841 PANTHER FLIPPASE KINASE 1-RELATED 254 809 - -
Mibi07g1566 841 SMART serkin_6 457 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1566 841 SUPERFAMILY Protein kinase-like (PK-like) 431 810 IPR011009 -
Mibi07g1566 841 FunFam Serine/threonine-protein kinase D6PK-like 455 540 - -
Mibi07g1566 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Mibi07g1566 841 Gene3D Transferase(Phosphotransferase) domain 1 684 808 - -
Mibi07g1566 841 Gene3D Transferase(Phosphotransferase) domain 1 537 606 - -
Mibi07g1566 841 MobiDBLite consensus disorder prediction 397 428 - -
Mibi07g1566 841 MobiDBLite consensus disorder prediction 390 434 - -
Mibi07g1566 841 MobiDBLite consensus disorder prediction 312 367 - -
Mibi07g1566 841 FunFam serine/threonine-protein kinase D6PK-like 685 808 - -
Mibi07g1566 841 MobiDBLite consensus disorder prediction 256 280 - -
Mibi07g1566 841 Pfam Protein kinase domain 458 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1566 841 Pfam Protein kinase domain 687 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1566 Mibi-ChrMibi07 29223153 29226216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1566 390 841 AGC Kinase Gene Family AT3G52890 67.527 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi07g1566 Pkinase 7.5e-36 CL0016