Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1556 ATGCAATTGTGTGCAGGGGATTTTATAATCATACTAGGCATAATGGCGTATGCAACGATGAAGCCTTCCGTTAAACCCGGTTTGGAGGAGCCTGTGGAGCAGATTCATAAGATCAGGATTACTCTTTCCTCCAAGAACGTGAAGAATCTTGAGAAAGTTTGTGCTGACTTGGTTCGTGGTGCCAAGGACAAGAGGCTCAGGGTCAAGGGACCTGTGAGAATTCCTACTAAAGTTCTTCACATCACCACTAGGAAAGCCCCTTGTGGTGAAGGTACCAACACTTGGGACAGATTTGAGCTTCGTGTGCACAAGAGAGTTATTGACTTGTACAGCTCCCCAGATGTGGTTAAGCAGATTACTTCAATTACAATTGAACCTGGTGTGGAAGTTGAGGTTACCATTGCAGATGCTTGA 414 0.4517 MQLCAGDFIIILGIMAYATMKPSVKPGLEEPVEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRIPTKVLHITTRKAPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1556 137 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 30 136 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mibi07g1556 137 Pfam Ribosomal protein S10p/S20e 39 133 IPR027486 -
Mibi07g1556 137 TIGRFAM uS10_euk_arch: ribosomal protein uS10 36 134 IPR005729 GO:0003735|GO:0006412|GO:0015935
Mibi07g1556 137 ProSitePatterns Ribosomal protein S10 signature. 61 76 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mibi07g1556 137 PRINTS Ribosomal protein S10 family signature 94 108 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mibi07g1556 137 PRINTS Ribosomal protein S10 family signature 72 87 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mibi07g1556 137 PRINTS Ribosomal protein S10 family signature 37 50 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mibi07g1556 137 SMART Ribosomal_S10_2 39 133 IPR027486 -
Mibi07g1556 137 Hamap 30S ribosomal protein S10 [rpsJ]. 35 134 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mibi07g1556 137 Gene3D Ribosomal protein S10 domain 23 136 IPR036838 -
Mibi07g1556 137 FunFam 40S ribosomal protein S20 21 136 - -
Mibi07g1556 137 SUPERFAMILY Ribosomal protein S10 37 134 IPR036838 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1556 Mibi-ChrMibi07 28980052 28982378 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1556 15 137 Cytoplasmic Ribosomal Protein Gene Family AT3G47370 90.244 2.54e-77 223