Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1539 ATGAACCAAAGTCTCGACCGGTTCAGACCGAACCATCCATCAGATTTCAAGAAAATTTTGGTTCAATTAGCACTTGAACAAGCACAAGCCATGCATAAGGAAGCTCAAGAATATGGCCCAAAATGTGTGACCAAGATGCAGAAATGTGTGTTTAGTGATTGTTTAAACCTCTATGACAAAACCATCTTCCATCTAAACCGAACGCTTCATGCCTTATACTCAACTTCTTGCTCTCTATCAGATGCACAAACATGGCTAAGCACTGCCCTAACAAACATCGATACTTGCCAGAGCGGTGCGTTTCAGCTAGGAGTCAGAGAGTTTACATCACCATATAATGTGAGTGACAATGTTAGAAAGATGATAAGCAATGTGTTAGCTGTTAATGGGAAATTCATGAAGCAAGCGAATTACAAAGAAGAAGAGATAAAAGCACATGGGTTTCCCAGTTGGTTTTCTCGGCACGATAGGAGGTTGTTGAGCTTAAAGCCATCTTCTGTGAAAGCAAATCTTGTGGTGGCTCAAGATGGTTCTGGCCACTTTAGGACAGTTCAAGCAGCCATTGATGTAGCATCAAGGAGAACAGTGAATACGAGATTTGTGATACATGTGAAGAAAGGGATATATCAAGAGAATATTGAAGTTGATAAGAATACTGAAAATCTCATGATAATTGGTGATGGAATGAGAGTCACTATCATAACTGGTAGTAAAAGTGTCAAAGATGGAATTACCCCCTCTATGTCTGCAACAGCTGGTATAGATGGAGCTCACTTCATGGCACGAGACATCACTTTTAGAAACACGGCTGGTCCTGCAAAAGGTCAAGCTGTAGCACTCCGATCAGCCTCCGACCTTTCCGTCTTCTATCAGTGTTCCATCGAAGGCTATCAAGACACTCTAATGGCTGATTCACAACGCCAATTCTATAGGGATTGTAAAATTTTCGGCACAGTGGATTTCATTTGGGGCAATGCCGCAGTTGTTTTGCAAAATTGTAGAATTCTTGTAAGAAAGCCAGTTCAAGGGCAACCAAACATGATCACAGCACAAGGACGAGGTGATCCATTCCAAAACACAGGAATATCAATAATCAATTGTCAAATTCAAGCGGCGCCAGATTTCAGGCAGGTTTATCACTCATTTGACACATATTTGGGTAGGCCATGGCAGCAATATGCTAGAGTAGTTGTAATGAAGACTTACATTGAAGGATTGGTGAATCCATTGGGATGGTCTCCATGGGACAATAGTGGTGCTGGTGAAGATACATGTTATTTAGGGGAATATATGAACACTGGGGCTGGTTCATCAACAAAAAGTAGGGTACATTGGCCTGGCTTTCATGTCATAACTAATCCAAATGAGGCAAACCAATTCAGTGTTGCTAGTTTCCTTGCTGGGAGCACATGGTTGCCTAGCACTGGGGTGCCTTTTACCATTGGTATTAATTAA 1455 0.4172 MNQSLDRFRPNHPSDFKKILVQLALEQAQAMHKEAQEYGPKCVTKMQKCVFSDCLNLYDKTIFHLNRTLHALYSTSCSLSDAQTWLSTALTNIDTCQSGAFQLGVREFTSPYNVSDNVRKMISNVLAVNGKFMKQANYKEEEIKAHGFPSWFSRHDRRLLSLKPSSVKANLVVAQDGSGHFRTVQAAIDVASRRTVNTRFVIHVKKGIYQENIEVDKNTENLMIIGDGMRVTIITGSKSVKDGITPSMSATAGIDGAHFMARDITFRNTAGPAKGQAVALRSASDLSVFYQCSIEGYQDTLMADSQRQFYRDCKIFGTVDFIWGNAAVVLQNCRILVRKPVQGQPNMITAQGRGDPFQNTGISIINCQIQAAPDFRQVYHSFDTYLGRPWQQYARVVVMKTYIEGLVNPLGWSPWDNSGAGEDTCYLGEYMNTGAGSSTKSRVHWPGFHVITNPNEANQFSVASFLAGSTWLPSTGVPFTIGIN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1539 484 CDD PMEI-like_3 10 134 - -
Mibi07g1539 484 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 12 133 IPR035513 -
Mibi07g1539 484 Gene3D - 164 483 IPR012334 -
Mibi07g1539 484 FunFam Pectinesterase 164 483 - -
Mibi07g1539 484 Pfam Pectinesterase 170 468 IPR000070 GO:0030599|GO:0042545
Mibi07g1539 484 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 130 IPR006501 GO:0004857
Mibi07g1539 484 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 132 IPR035513 -
Mibi07g1539 484 Pfam Plant invertase/pectin methylesterase inhibitor 15 127 IPR006501 GO:0004857
Mibi07g1539 484 SMART PMEI_2 3 128 IPR006501 GO:0004857
Mibi07g1539 484 SUPERFAMILY Pectin lyase-like 167 482 IPR011050 -
Mibi07g1539 484 PANTHER PECTINESTERASE 17 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1539 Mibi-ChrMibi07 28470716 28472275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1539 9 483 Carbohydrate Esterase AT5G51490 55.602 0.0 555