Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1528 ATGGCATCATTCACAGTTAAAATATTCTTCTCACTTGCCTTATTTTCTTCACTTTTCTCAATATCATTATCATTATCTTCTTCATCAACAAAATCATCTTCATGTATAGATTTTTGGTGCAACCAAACTCCTCATCCCGAGCCATGCAAATACCACATGAGCGGCAGCCACCATCGGTTCAGACCGAACCACCGGTCCGAATTCAGGAAAATGCTTATTCAGTTAGCCATGGAACAAGCTCAAGCTATGCATAAGGAAGCACAAGAGTATGGCCCAAAATTTGTTACCACAACTCAAAACTATGTGTTCAATGATTGTTTAAACCTCTATGATAACACCATCTTCCATCTAAACCAAACCCTTCATGCCCTACGCACAACTTCTTGTTCTCTATCAGATGCACAAACATGGCTCAGTACTGCCCTCACAAACATCGAAACCTGCCATAGCACGGCGTCGCAGCTCGGAGTCAAAGAGTTCATGGCTCAAAATAACTCAAGCCACAATGTTAAGAAGATGATAAGCAATCTATTAGCAGTGAACGGTGAGATTTTGAAGCAAGAGAATGATAATAACAAAGAGAGAAAAACACATGGGTTTCCAAGTTGGTTTTCAAGGAACCATAGGAGGTTGTTGAGCTTGAGTTCATCTTCTTTGAAGGCTAATGTTGTGGTGGCTCAAGATGGTACGGGCAATTTTAAGACGGTGCAAGCTGCCATTGATGTAGCATCAAGGAGAGCAGTGAAGACGAGGTTTGTGATACATGTGAAGAAGGGGGTTTATGAAGAGAATATTCAAGTTGATAAGAATAATCAAAATCTCATGATTGTTGGTGATGGAATGAGAGTTACCATTATAACTGGTAATAGAAGCGTTAAAGATGGAATTACCCCCTCTATGTCGGCAACAGCAGGGATAGATGGTGCTCATTTCATTGCCCGAGACATCACTTTTAGAAACACAGCCGGTCCAGAGAAAGGTCAAGCCGTGGCAGTCCGATCGGCCTCCGATCTATCGGTTTTCTACCGGTGCTCCATTGAAGGTTATCAAGACACTCTAATGGCTCATGCACAACGTCAATTCTATAGAGACTGTAGAGTTTTTGGCACAGTAGATTTCATTTGGGGTAATGCTGCCGTAGTTTTACAAAATTGCACCATTCTTGCAAGAAAGCCCTTACAAGGACAAGCAAATATGATCACAGCTCAAGGACGAGGTGACCCGTTTCAAAACACCGGGATATCGATAATAAACTCTCAAATTCGAGCTGCGCCGGATCTTAGACCTGTTGTAAAATCATACCAAACATATTTGGGTAGGCCATGGCAACAATATTCCCGAGTGGTTATCATGAAAAGCTATATTGAAGGATTGGTGAATCCATTGGGTTGGTCTCCATGGGGTAATGACGATTTTGCTCAAGATACGTTGTATTTTGGGGAATATATGAATTATGGGAATGGTTCATCAACAAATGATAGGGTTAAATGGCCTGGGTTTCATGTCTTGACGAGCCAGAATGATACACAACAGTTTACTGTGGCTGGACTACTTGCTGGTAACACATGGTTGCCACAAACCGGTGTGCCATTTGATATTGATATTTAA 1608 0.4167 MASFTVKIFFSLALFSSLFSISLSLSSSSTKSSSCIDFWCNQTPHPEPCKYHMSGSHHRFRPNHRSEFRKMLIQLAMEQAQAMHKEAQEYGPKFVTTTQNYVFNDCLNLYDNTIFHLNQTLHALRTTSCSLSDAQTWLSTALTNIETCHSTASQLGVKEFMAQNNSSHNVKKMISNLLAVNGEILKQENDNNKERKTHGFPSWFSRNHRRLLSLSSSSLKANVVVAQDGTGNFKTVQAAIDVASRRAVKTRFVIHVKKGVYEENIQVDKNNQNLMIVGDGMRVTIITGNRSVKDGITPSMSATAGIDGAHFIARDITFRNTAGPEKGQAVAVRSASDLSVFYRCSIEGYQDTLMAHAQRQFYRDCRVFGTVDFIWGNAAVVLQNCTILARKPLQGQANMITAQGRGDPFQNTGISIINSQIRAAPDLRPVVKSYQTYLGRPWQQYSRVVIMKSYIEGLVNPLGWSPWGNDDFAQDTLYFGEYMNYGNGSSTNDRVKWPGFHVLTSQNDTQQFTVAGLLAGNTWLPQTGVPFDIDI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1528 535 Pfam Plant invertase/pectin methylesterase inhibitor 36 179 IPR006501 GO:0004857
Mibi07g1528 535 FunFam Pectinesterase 216 535 - -
Mibi07g1528 535 PANTHER PECTINESTERASE 19 525 - -
Mibi07g1528 535 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 184 IPR035513 -
Mibi07g1528 535 Gene3D - 216 535 IPR012334 -
Mibi07g1528 535 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 182 IPR006501 GO:0004857
Mibi07g1528 535 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 183 IPR035513 -
Mibi07g1528 535 SUPERFAMILY Pectin lyase-like 218 533 IPR011050 -
Mibi07g1528 535 SMART PMEI_2 31 180 IPR006501 GO:0004857
Mibi07g1528 535 CDD PMEI-like_3 39 186 - -
Mibi07g1528 535 Pfam Pectinesterase 222 521 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1528 Mibi-ChrMibi07 27892959 27895039 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1528 39 531 Carbohydrate Esterase AT5G51490 55.400 0.0 580