Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1527 ATGGCATCAATCATTGTTAAGCTATTCTTTTCCCTCACTTTATTTTCTTCACTTTTCTCTCCATCATCATCATCATCCTCTTCTCCTTCATCTACAGATTTTTGGTGCAACCAAACCCCTCACCCTGAGCCATGCAAATACCACATGACCCAAAGTCTCGACCGTTTCAGACCTAATCGTCTTTCAGAGTTCAAGAAAATGCTAATTCAATTAGCACTAGACCAAGCACAAGCCATGCATAAGGAAACTCAAGAATATGGCCCAAAATGTGTCACCAAGACGCAGAAATGTGTGTTTAGTGATTGTTTAAAGCTCTATGAAAAAACAATCTTCCATCTAAACCGAACCCTACATGCCTTACACACTACTTCTTGCTCTCTCTCAGATGCACAAACATGGCTCAGCACTGCCCTAACAAACATCGAAACTTGCCGGAGCAGCGCTGTACAGCTCGGATTCGGAGAGTTTACATCTCAAAATAATGTGAGTGACAATGTTAGAAAGATGATAAGCAATGTGTTAGCTGTTAATGGGAAATTCATGAAGCAAGAGGATATCAAAGAAGAAGAGATTAAAGCACATGGTTTTCCGAGTTGGTTTTCTAGGCACGAGAGGAGATTGTTGAGCTTGAAGCCATCTTCAGTGAAGGCAAGCCTTGTTGTGGCAAAAGATGGAACTGGCCACTTTAAGACAGTTCAAGCAGCCATTGATTTAGCATCAAGGAGAAAAGTGAAGACGAGGTTTGTGATACATGTGAAGAAAGGGATTTATGAAGAGAATATTGAAGTTGATGTGAATAATGAAAATCTCATGATTATTGGAGATGGAACAAGAGTCACCATTATAACTGGCAGTAAAAGTGTTCAAGATGGAATTACACCCTCTATGTCTGCAACAGCAGGTATAGATGGAGCTCACTTCATTGCACGAGATGTCACTTTTAGAAACACAGCTGGGCCTGAAAAAGGTCAAGCCGTGGCGCTCCGATCAGCCTCCGACCTATCTGTCTTCTATCGGTGTTCCATTGAAGGGTATCAAGACACTCTAATGGCTGATTCACAGCGCCAATTCTATAGAGATTGTAGGATTTTTGGCACAGTGGATTTCATTTGGGGCAATGCCGCAGTTGTCTTACAAAATTGTAGAATTCTTGTGAGAAAACCACTTCAAGGGCAAGCAAACATGATCACAGCACAAGGACGAGGTGACCCATTTCAAAACACAGGAATCTCAATCATCAATTCTCAAATTCGAGCGGCGCCAGATTTCAGGCCTGTTTATCACTCATTTGAAACATATTTGGGTAGGCCATGGCAACAAAATGCTAGAGTAGCTATCATGAAAACTTACATTGAAGGATTGGTCAATCCATTGGGATGGTCTGCATGGGGTGATAGTAATTTTGCTCAAGATACGTGTTATTTTGGGGAATATATGAATTATGGAGCTGGTTCATCAACTAAAAGTAGGGTACAATGGCCTGGTTTTCATGTCATAAGTAATCCAAATGAGGCAAACCAATTCAGTGTTGCTAGTTTCCTTGCTGGAAGCACATGGTTGCCTCGCACTGGAGTGCCCTTTACTATTGGTGTTTAA 1596 0.4148 MASIIVKLFFSLTLFSSLFSPSSSSSSSPSSTDFWCNQTPHPEPCKYHMTQSLDRFRPNRLSEFKKMLIQLALDQAQAMHKETQEYGPKCVTKTQKCVFSDCLKLYEKTIFHLNRTLHALHTTSCSLSDAQTWLSTALTNIETCRSSAVQLGFGEFTSQNNVSDNVRKMISNVLAVNGKFMKQEDIKEEEIKAHGFPSWFSRHERRLLSLKPSSVKASLVVAKDGTGHFKTVQAAIDLASRRKVKTRFVIHVKKGIYEENIEVDVNNENLMIIGDGTRVTIITGSKSVQDGITPSMSATAGIDGAHFIARDVTFRNTAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMADSQRQFYRDCRIFGTVDFIWGNAAVVLQNCRILVRKPLQGQANMITAQGRGDPFQNTGISIINSQIRAAPDFRPVYHSFETYLGRPWQQNARVAIMKTYIEGLVNPLGWSAWGDSNFAQDTCYFGEYMNYGAGSSTKSRVQWPGFHVISNPNEANQFSVASFLAGSTWLPRTGVPFTIGV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1527 531 Pfam Pectinesterase 219 516 IPR000070 GO:0030599|GO:0042545
Mibi07g1527 531 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 180 IPR035513 -
Mibi07g1527 531 Gene3D - 212 531 IPR012334 -
Mibi07g1527 531 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 178 IPR006501 GO:0004857
Mibi07g1527 531 Pfam Plant invertase/pectin methylesterase inhibitor 35 175 IPR006501 GO:0004857
Mibi07g1527 531 FunFam Pectinesterase 212 531 - -
Mibi07g1527 531 PANTHER PECTINESTERASE 13 521 - -
Mibi07g1527 531 CDD PMEI-like_3 35 182 - -
Mibi07g1527 531 SUPERFAMILY Pectin lyase-like 215 530 IPR011050 -
Mibi07g1527 531 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 181 IPR035513 -
Mibi07g1527 531 SMART PMEI_2 26 176 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1527 Mibi-ChrMibi07 27889474 27891341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1527 30 531 Carbohydrate Esterase AT5G51490 54.617 0.0 578