Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1526 ATGGCATCAATCATTGTTAAGCTATTCTTTTCCCTCACTTTATTTTCTTCGCTCTTCTCAATATCTTCTTCTTCATCAGCAAAATCATCTTCATCTATAGACTTTTGGTGCAACCAAACTCCTCACCCTGAGCCATGCAAATACCACATGACCCAAAGTGTCGACCGGTTCAGACCAAATCACATGTCAGATTTCAAGAAAATGCTAATTGAATTAGCACTTGAACAAGCACAAGCCATGCATAAGGAAGCTCAAGAATATGGCCCAAAATGTGTGACCAAGATGCAGAAATGTGTGTTTAGTGATTGTTTAAAGCTCTATGATAAAACCATCTTTCATCTAAACCGAACCCTTCATGCCATACACACAACTTCTTGCTCTCTCTCAGATGCACAAACATGGCTCAGTTCTGCCCTCACAAACATCAATACTTGCCGGAACAGCGCAGTTCAGCTTGGAGTCGGAGAGTTTACATCTCAAAATAATGTGAGTGACAATGTCAGAAAGATGATAAGCAATGTGTTAGCTGTCAATGGAAAATTCATGAAGCAAGAGAATTACAAAGAAGAAGAGATTAAAGCACATGGGTTTCCCAGTTGGTTTTCTAGACACGAAAGGAGGTTATTGAGCTTGAAGCCATCTTCAGTGAAGGCAAATCTTGTTGTGGCTCAAGATGGAACTGGCCACTTTAAGACAGTACAAGCAGCCATTGATGTAGCATCAAGGAGAAAAGTGAAGACAAGATTTGTGATACATGTGAAGAAAGGTATTTATGAAGAGAATATTGAAGTTGATAGTAGTAATGAAAATCTCATGATAATTGGTGATGGAATGAGAGTCACTATTATAACTGGTAGTAAAAGTGTCAAAGACGGAATTACCCCCTCTGTGTCTGCAACAGCAGGTATAGATGGTGCTCACTTCATGGCACGAGACATCACTTTTAGAAACACGGCCGGGCCTGAAAAAGGTCAAGCCGTGGCACTCCGATCGGCCTCCGATTTGTCCGTCTTCTATCGGTGTTCCATTGAAGGCTATCAAGACACTCTAATGGCTGATTCACAACGCCAATTCTATAGAGATTGTAGAATTTTTGGCACAGTGGATTTCATTTGGGGAAATGCCGCAGTTGTTATACAAAATTGCAGAATTCTTGTGAGAAAGCCACTTCAAGGGCAAGCAAATATGATCACAGCTCAAGGACGAGATGACCCATTTCAAAACACAGGAATATCAATAATTAATTCTCAAATTCAAGCGGCGCCAGATTTCAGGCCTGTTTATCACTCATTTGAAACGTATTTGGGTAGGCCATGGCAGCAATATGCTAGAGTAGCTATCATGAAGACTTATATTGAAGGATTGGTGAATCCATTGGGATGGTCTCCATGGGACAATAGTGGTACTGGTGAAAGTACATGTTATTTTGGTGAATATATGAACACTGGGGCTGGATCATCAACAAAAAGTAGGGTACAATGGTCTGGCTTTCATGTCATTACTAATCCAAATGAGGCAAACCAATTCAGTGTTGCTAGTTTCCTTGCTGGGAGCACATGGTTGCCTCGCACTGGGGTGCCTTTTACCATAGGTGTTAATTAA 1602 0.4095 MASIIVKLFFSLTLFSSLFSISSSSSAKSSSSIDFWCNQTPHPEPCKYHMTQSVDRFRPNHMSDFKKMLIELALEQAQAMHKEAQEYGPKCVTKMQKCVFSDCLKLYDKTIFHLNRTLHAIHTTSCSLSDAQTWLSSALTNINTCRNSAVQLGVGEFTSQNNVSDNVRKMISNVLAVNGKFMKQENYKEEEIKAHGFPSWFSRHERRLLSLKPSSVKANLVVAQDGTGHFKTVQAAIDVASRRKVKTRFVIHVKKGIYEENIEVDSSNENLMIIGDGMRVTIITGSKSVKDGITPSVSATAGIDGAHFMARDITFRNTAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMADSQRQFYRDCRIFGTVDFIWGNAAVVIQNCRILVRKPLQGQANMITAQGRDDPFQNTGISIINSQIQAAPDFRPVYHSFETYLGRPWQQYARVAIMKTYIEGLVNPLGWSPWDNSGTGESTCYFGEYMNTGAGSSTKSRVQWSGFHVITNPNEANQFSVASFLAGSTWLPRTGVPFTIGVN 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1526 533 Gene3D - 213 532 IPR012334 -
Mibi07g1526 533 SUPERFAMILY Pectin lyase-like 216 531 IPR011050 -
Mibi07g1526 533 Pfam Pectinesterase 219 517 IPR000070 GO:0030599|GO:0042545
Mibi07g1526 533 CDD PMEI-like_3 36 183 - -
Mibi07g1526 533 PANTHER PECTINESTERASE 15 522 - -
Mibi07g1526 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 181 IPR035513 -
Mibi07g1526 533 FunFam Pectinesterase 213 532 - -
Mibi07g1526 533 Pfam Plant invertase/pectin methylesterase inhibitor 32 176 IPR006501 GO:0004857
Mibi07g1526 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 182 IPR035513 -
Mibi07g1526 533 SMART PMEI_2 28 177 IPR006501 GO:0004857
Mibi07g1526 533 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1526 Mibi-ChrMibi07 27875057 27876658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1526 36 532 Carbohydrate Esterase AT5G51490 54.365 0.0 580