Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1504 ATGGCTGATTCACGGGTTCTTCACCGCCCAACCGCTGGCATCATCAAGAGGGTTCGATTGGAGAACTTCATGTGCCATAGCAACCTTGAGATTGAGCTCGGAGAGTGGGTTAACTTTATTACTGGTCAAAATGGAAGTGGTAAGAGCGCAATCCTGACTGCACTGTGTGTTGCATTTGGATGTCGAGCAAGAGGGACTCAGAGAGCGGCGACTCTCAAGGATTTTATAAAAACTGGCTGCAGTTCTGCTGTCATCCATGTGGAAATAAAAAATGAAGGTGAGGATGCTTTTAAGCCCCAAATATATGGTGATATGATCACTGTAGAACGCAGGATATCTGAATCCACGAGCTCCATCGTGTTAAAAGACTACAAAGGAAAGAAGGTTGTTAGCCGGAAAGCTGAACTCCAGGAAATGGTTGAGCATTTTAATATTGATGTAGAGAATCCATGTGTAGTTATGAGTCAAGACAAAAGCAGGGAATTTTTGCATTCAGGGAATGACAAGGATAAATTTAAGTTCTTTTACAAGGCTACGCTTCTTCAGCAAGTTGATGATCTTTTGGAAAGTGTTTCTAAGGGATTAGAGCATTCATTTGGACTTCTTGGAGGATTAGAGGCTACAATAAGGCCTGTAGAGAAGGAACTTAACGAGTTGAGAGTCAAAATTACAAACATGGAACAAGTTGAACAAATATCGCTGCAAATTCAGCAGTTAAAGAAAAAACTTGCGTGGTCATGGGTTTATGATGTGGACAAACAAATCCAGGAACAACGTTCAAAGATTGATAAATTAAAGGATCGAATACCTAAGTGCCAAACCAAAATTGATGACCAAATGCATATGGTTGAAGAATTGAGGGCATGCTTACATAAGAAGAAAGGTTATATCAAAAACTTGTTTGAAAAGACGTCTGAGGTTAAGCAGAAGAAGCAACATTTACAACAATCTATATCTATGGCTGCAAAAGAACTGCTTGAAAAAGAACAGGAGTGCAAACGCATAACAGTCGGCATTGAAAAGATGGTTAAGCGTGTTAGGACTCTTGAAGAACAAGTGCGAGATATTTATGAGAAGCATGCACAAAATACTCAGGCTGAAGAATCTGAGATAGAGGAGATACTGAAGGTGCTCCAAAATGAGGTCGATGTTGCTGAATCAGCTTTGACAAGGTTGAGGGAAGAGGAAACTATACTAGCCGACAATGTACAAAGACAAAGTAATGAAATAAGAAAGATTGCTGATGAGATTGACGGACACGATAGACGGTATCGTGATATAAACTCTTCCATCCGTGAGCTTAAGCAACACCAAACCAATAAGGTTACAGCTTTTGGAGGAGATAGAGTGATGAACCTACTGCGTATTATTGAGAGAAGCTATCGGAGGTTTAAGAGGCCACCCATCGGTCCAATTGGTGCCCATCTGAATCTGGTTAATGGCGATAGGTGGGGTGTTGCTATTGAGCATGCAATTGGGAAGATGCTGAATGCTTTTATAGTGACTGATCACAAGGATTCTCTTCTTTTGAGAGAATGTGCAAAGGAAGCACACTATGGTCACCTCCAAATTTTCATTTATGATTTTTCAAGACCACGATTGTCTTTACCAGCACACATGCTTCCTCAGACAACACATCCTTCAATTCTTTCTGTTTTATATTCGGCCAATGACACCGTGATCAATGTCTTGGTGGATCTGGGGAGCATTGAGAGACAAATTCTTGTTAGGGACTATGATACTGGTAAAATGGTTGCATTTGACGAAAGGATTTCAAATCTGAAGGAGGTCTTCACTTCAGATGGCTATAAAATGTTTTCTCGGGGCTCAGTGCAGACAGTCCTGCCCCCAAATAAGAGGCAGAGAACTAGTCGACTATGTAGTTCTTTTGATAATCAAATTAATGTACTTGAAGCTGATGCTTCCCATGAACAAGAAGCAGCTAATCGCTTAAAGAGAAATAAAAGGGAGGCTGAAGAAAAGCTTGAGGATCTTAATGGGAGGCTAAGACATGTGAAGAGGCTTTGTTCGAATGCACAGAAGGATTTGTCTGCTAAGAAATTAGCATTTGAAGACGAGAGGAACCAGTATGCGATGGCAAAACGCTCATCACCTGCATCATCTGTGGATGAGATTCAACAAGAAATTTCTGAAGTCCAACACGAGATAGAAAGGAAGAAAGACTTGTTGAAAGAATGTCAGAACAGGACGAGTGAAGCATCAGCAAAGACAGATCATCTTAAAATGTCATTTGAAGAACTATGTGCATCAACACAAGATGAGATTAGTGCCCTTGAGAAAGCAGAGAATGAACTAATGCAGATTGAACGGGACATGCGTTCAGCAGAAGAGGAGAAGGCTCATTATGATGGGATAATGCAACGCAAGGTACTCCCAGATATTAAAGAGGCAGAGGCATGCTATGAGGAGCTCAAGCAGCAACGAGAGGAATATAGCAGAAAGGCTTCTATAATTTGTTGTGAGGATGAACTTCAGTCTTCTGGAGATTGCAGCGGAAGTACCCCAGAGCAACTCAGCGCACAGATAGAAAGACTATCTCAGAGACTCAAGCGTGAGAGTCAAAGATACACAGAATCACTAGATGATCTAAGGATGCTGTGTGAGAAAAAAGAACGTAAGATTTTGAGAAAGCAGCAAGCTTACAAAGCGTATCGAACAAAATTAGATGCTTGTCAGAGAGCTTTAGAATTACGGAGGAACAAGTTTCGCAGAAATGCAACTTATTTGAGGCGTTTGTTGTCTTGGAAATTTAATGCTCATTTGGGAAGAAAAGGATTCAGTGGACTTATCACAGTCAATTATGAAGAAAAAACCCTTTCAATCAAGGTGCAAATGCCTCAAGATGCATCAGGATTTGCTGTCCGTGACACCCGAGGTCTTTCAGGTGGCGAGCGTTCTTTTTCAACACTCTGCTTTACTTTAGCTCTTCATGATATGACAGAATCCCCTTTCCGTGCGATGGATGAATTTGATGTTTTTATGGATGCAGTCAGTCGAAAAATCAGCTTGGACACTCTCGTGGACTTTGCTGTGGAACAAGGATCCCAGTGGATATTTATCACCCCACATGATATTAGCATGGTTAAACAGGATAACAGAATAAGGAAGCAGCAAATAGCAGCTCCCCGATCTTGA 3156 0.4119 MADSRVLHRPTAGIIKRVRLENFMCHSNLEIELGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATLKDFIKTGCSSAVIHVEIKNEGEDAFKPQIYGDMITVERRISESTSSIVLKDYKGKKVVSRKAELQEMVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFYKATLLQQVDDLLESVSKGLEHSFGLLGGLEATIRPVEKELNELRVKITNMEQVEQISLQIQQLKKKLAWSWVYDVDKQIQEQRSKIDKLKDRIPKCQTKIDDQMHMVEELRACLHKKKGYIKNLFEKTSEVKQKKQHLQQSISMAAKELLEKEQECKRITVGIEKMVKRVRTLEEQVRDIYEKHAQNTQAEESEIEEILKVLQNEVDVAESALTRLREEETILADNVQRQSNEIRKIADEIDGHDRRYRDINSSIRELKQHQTNKVTAFGGDRVMNLLRIIERSYRRFKRPPIGPIGAHLNLVNGDRWGVAIEHAIGKMLNAFIVTDHKDSLLLRECAKEAHYGHLQIFIYDFSRPRLSLPAHMLPQTTHPSILSVLYSANDTVINVLVDLGSIERQILVRDYDTGKMVAFDERISNLKEVFTSDGYKMFSRGSVQTVLPPNKRQRTSRLCSSFDNQINVLEADASHEQEAANRLKRNKREAEEKLEDLNGRLRHVKRLCSNAQKDLSAKKLAFEDERNQYAMAKRSSPASSVDEIQQEISEVQHEIERKKDLLKECQNRTSEASAKTDHLKMSFEELCASTQDEISALEKAENELMQIERDMRSAEEEKAHYDGIMQRKVLPDIKEAEACYEELKQQREEYSRKASIICCEDELQSSGDCSGSTPEQLSAQIERLSQRLKRESQRYTESLDDLRMLCEKKERKILRKQQAYKAYRTKLDACQRALELRRNKFRRNATYLRRLLSWKFNAHLGRKGFSGLITVNYEEKTLSIKVQMPQDASGFAVRDTRGLSGGERSFSTLCFTLALHDMTESPFRAMDEFDVFMDAVSRKISLDTLVDFAVEQGSQWIFITPHDISMVKQDNRIRKQQIAAPRS 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1504 1051 SUPERFAMILY Methyl-accepting chemotaxis protein (MCP) signaling domain 270 439 - -
Mibi07g1504 1051 Coils Coil 709 743 - -
Mibi07g1504 1051 SUPERFAMILY Smc hinge domain 423 604 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Mibi07g1504 1051 Coils Coil 634 682 - -
Mibi07g1504 1051 Gene3D - 179 359 - -
Mibi07g1504 1051 Coils Coil 758 785 - -
Mibi07g1504 1051 Pfam RecF/RecN/SMC N terminal domain 15 1038 IPR003395 -
Mibi07g1504 1051 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 11 1050 - -
Mibi07g1504 1051 Coils Coil 248 275 - -
Mibi07g1504 1051 Coils Coil 361 395 - -
Mibi07g1504 1051 Coils Coil 849 887 - -
Mibi07g1504 1051 CDD ABC_SMC6_euk 952 1051 - -
Mibi07g1504 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 1040 IPR027417 -
Mibi07g1504 1051 Coils Coil 339 359 - -
Mibi07g1504 1051 Coils Coil 311 331 - -
Mibi07g1504 1051 Gene3D - 14 165 IPR027417 -
Mibi07g1504 1051 Coils Coil 801 821 - -
Mibi07g1504 1051 CDD ABC_SMC6_euk 15 169 - -
Mibi07g1504 1051 Gene3D - 765 1046 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1504 Mibi-ChrMibi07 27324752 27354659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1504 2 1051 Structural Maintenance of Chromosomes family AT5G61460 61.048 0.0 1261