Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1494 ATGAGGAAAGTGTACATTCACCATGTAGTCACTCCAATCGATGCTTTCAACTCCCTCCCCACTTTGTTGCCATCCTTAGCTTTTTTGTGTTGGTCTCATGTTGCTTGCCTGGTTTTTTGGTCACAATACCATTGTCAGCTCATTTCAGGACTAACAGAAACTGAAGCTCTTCTCAGATGGAAGCAAAATCTGCCATACCAATCAATTTTGGACTCATGGATCTCTCCGCCTCAAGCAAATTCCAGTGAAGCCCAAGCCCTATGTTCATGGCGTGGTGTAATGTGTGATTCTTCAGGAAGTGTGGTTGAACTCAACTTGAACAACACTGGTCTCAAAGGTACCCTTAAACACTTGAATTTCTCAGCGTTCCCGAATCTTGTTCTTCTTAATCTCGAATTTAATCAACTCACTGGCCCCATACCCGAAACAATTGGCTTGCTCTCAAAACTACAATTCCTTGACCTTGATCATAATTATCTCAATGGCACTATACCCCTTTCCCTTGCTAATCTCACTCAACTTTATGAGCTTGACCTTTCAAAAAATCAGATAACTGGGATATTAGACCCTCGTCTATTCCCTGACGGATCTGATGAACCCAAAACTGGCTTGATTGGGATACAAAATCTTGTGCTTCAAGGCTTGCTCCTCGGAGGCAAAATTCCAAATGAAATAGGTAATTTGAAACAATTGACCATTCTAGCTCTATACCAAAATAGCTTTTATGGACCTATACCTCAGTCTCTGGGGAATTGCACACATCTAAACATTCTCTCTTTGGCTTCAAACAGTCTCTCAGGCACTATTCCCCCTGTTCTAAGTACACTACCCAACCTGACTGATATTCGCTTGTTTTTTAACAATTTATCCGGGCCTTTACCACAAGGATTCCAAAATCGTTCTTTTACTGTGCTTTATCTCTCTAATAACAATTTCACTGGTCAGTTACCACCACAAGTATGCAAAGATGGTGGCTTACTTAACTTCACTGCGGCTTACAATAGTTTCACTGGTCCAATCCCAATGAGCATCAGAAACTGCACATCTTTATTTAGACTTCGTCTTGAACATAATCAATTGACCGGAGATGTAGATAAGGATTTGGGAGTTTACCCTAATCTTACCTACATTGACATCAGCTACAATAAGCTTCAGGGCAAACTTTCTGCAAATTGGGGTGCCTGCAAGAACTTGCAAGCTCTTAGTTTGGCTGGAAATTCAATAGGGGGAATATTACCTAGTGAGATCTTTCAGTTGAAGCACATACAAAAGCTTGACTTGTCTTCAAACGTTATATCTGGCAAGATTCCTCCTCAAATTGGAATCAGCTCTCGCTTGTACCAACTACATTTGGGTGGCAACAATCTTTCAGGTTTGATCCCAGAAGGAATTGGCAAGCTTTCTAGTCTTGCATCTTTGGATCTCTCAATGAATAGCTTAAGGGGACCTATCCCTTATCAAATAGGTGATTGCTATCAGTTGCTGGATTTAAATTTTAGCAACAATTACCTTACTGGGAAAGTCCCCTACCAAATAGGAAATCTTGTGGCTTTACAAGATTTTTTGGACTTGAGTTTTAATTCACTTTCTGGAGAAATCCCTATTGATCTTGGTAAACTCAACAAGTTGATAAGCTTGAATATATCTCATAACAATTTGTCGGGCCCTATCCATAATTTCCTAGCAACAATGTTAAGCTTGTCAAGCGTCAATCTCTCCCATAACAATTTGGAAGGTCCTGTACCAGATAGTGGAATTTTTAATTCTTCTGGTGCAGTGGATCTAAGTAACAATAAAAATTTATGTGGGAGGATCCAAGGTTTGAAACCTTGCAACACCTCAACTGTAAAGCCACATGGTGGAACTAAGAAAAAGGAAAATGTGATAGTTGTCACCTCTTCTTTGGCTGTGGCTTTGTTTTTGTTGGAAGTGATTAGCATTTTTATTACTCGCTATAAGAGAAATACAAGAGCTGTAAAACACAACACTGGAGACAGTGAAGAAAATCTATTCAACATATGTCACTTTGACGGCAAAATCAAGTGTGAAGACATAATTGAAGCAACGGGTAACTTTGCTGAAAAATACTACATTGGGGAAGGAGCTTTTGGAAAAGTTTATAAGTTGATATTACCAGGGGACAAAATATTTGCTGTAAAGAAGTTGATATGTGAAGTTCATAACCTTGATGTGGAAAGTATAAAAGCTTTTAAGAATGAGATCAAAGCCTTGACTGAGTCACGTCACCGTAACATTGTGAAGTTGTTCGGGTTTTGCTCAGAAAATCTGTACACGTTTCTGATTTATGAGTACATGGAAAGAGGGAGCTTGGCTGATGTGCTTAGAAACGATAGAGAAGCATCAGAGGTGGACTGGTCAAAAAGGTTTAATATTATCAAGAATGTGGCTCAAGCTTTATCTTACATGCATCATGATTGTAATCCACCAATTGTTCACAGAGACATATCTAGCAAAAACATTTTACTGTCATCAAATCTTGAAGCCCATGTCTCAGATTTTGGCACAGCAAGGTTTTTGAAGGCTGATTCATCAATTTGGACAACATTTGCTGGCACATTTGGTTATGCTGCTCCAGAGCTTGCATTCATAATGGCAGTGACTGAAAAACTTGATGTTTATAGCTTTGGTGTCTTGGCTATTGAGGTGCTTATGGGAGAGCATCCTGGTGAACTAATATTCAATAACCAAACAAGTGGGATGAATCATATCAACTTCATGGAGATTCTGGACGCTCGTTTATCATCAACAAATCAGCAAAACTTGAAGAAATTGGCTTTGATTTGGCATCTTGCTCTATCATGCGTACAAACAAACCCTCAGTCTCGGCCAAACATGCGAAGTGTTGCACAGTTGATGGAAATGGAGAGTGTTGATGAGACTTGA 2904 0.395 MRKVYIHHVVTPIDAFNSLPTLLPSLAFLCWSHVACLVFWSQYHCQLISGLTETEALLRWKQNLPYQSILDSWISPPQANSSEAQALCSWRGVMCDSSGSVVELNLNNTGLKGTLKHLNFSAFPNLVLLNLEFNQLTGPIPETIGLLSKLQFLDLDHNYLNGTIPLSLANLTQLYELDLSKNQITGILDPRLFPDGSDEPKTGLIGIQNLVLQGLLLGGKIPNEIGNLKQLTILALYQNSFYGPIPQSLGNCTHLNILSLASNSLSGTIPPVLSTLPNLTDIRLFFNNLSGPLPQGFQNRSFTVLYLSNNNFTGQLPPQVCKDGGLLNFTAAYNSFTGPIPMSIRNCTSLFRLRLEHNQLTGDVDKDLGVYPNLTYIDISYNKLQGKLSANWGACKNLQALSLAGNSIGGILPSEIFQLKHIQKLDLSSNVISGKIPPQIGISSRLYQLHLGGNNLSGLIPEGIGKLSSLASLDLSMNSLRGPIPYQIGDCYQLLDLNFSNNYLTGKVPYQIGNLVALQDFLDLSFNSLSGEIPIDLGKLNKLISLNISHNNLSGPIHNFLATMLSLSSVNLSHNNLEGPVPDSGIFNSSGAVDLSNNKNLCGRIQGLKPCNTSTVKPHGGTKKKENVIVVTSSLAVALFLLEVISIFITRYKRNTRAVKHNTGDSEENLFNICHFDGKIKCEDIIEATGNFAEKYYIGEGAFGKVYKLILPGDKIFAVKKLICEVHNLDVESIKAFKNEIKALTESRHRNIVKLFGFCSENLYTFLIYEYMERGSLADVLRNDREASEVDWSKRFNIIKNVAQALSYMHHDCNPPIVHRDISSKNILLSSNLEAHVSDFGTARFLKADSSIWTTFAGTFGYAAPELAFIMAVTEKLDVYSFGVLAIEVLMGEHPGELIFNNQTSGMNHINFMEILDARLSSTNQQNLKKLALIWHLALSCVQTNPQSRPNMRSVAQLMEMESVDET 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1494 967 FunFam Nuclear pore complex protein NUP107 51 193 - -
Mibi07g1494 967 Gene3D Ribonuclease Inhibitor 49 132 IPR032675 -
Mibi07g1494 967 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 320 615 - -
Mibi07g1494 967 ProSitePatterns Tyrosine protein kinases specific active-site signature. 817 829 IPR008266 GO:0004672|GO:0006468
Mibi07g1494 967 ProSiteProfiles Protein kinase domain profile. 692 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1494 967 Pfam Leucine rich repeat N-terminal domain 53 96 IPR013210 -
Mibi07g1494 967 Gene3D Ribonuclease Inhibitor 301 615 IPR032675 -
Mibi07g1494 967 Gene3D Transferase(Phosphotransferase) domain 1 772 966 - -
Mibi07g1494 967 Gene3D Ribonuclease Inhibitor 202 300 IPR032675 -
Mibi07g1494 967 SUPERFAMILY L domain-like 300 611 - -
Mibi07g1494 967 SMART LRR_typ_2 276 299 IPR003591 -
Mibi07g1494 967 SMART LRR_typ_2 467 491 IPR003591 -
Mibi07g1494 967 SMART LRR_typ_2 171 195 IPR003591 -
Mibi07g1494 967 SMART LRR_typ_2 123 147 IPR003591 -
Mibi07g1494 967 SMART LRR_typ_2 395 419 IPR003591 -
Mibi07g1494 967 SMART LRR_typ_2 564 589 IPR003591 -
Mibi07g1494 967 SUPERFAMILY Protein kinase-like (PK-like) 681 961 IPR011009 -
Mibi07g1494 967 PANTHER LEUCINE RICH REPEAT KINASE 2 210 961 - -
Mibi07g1494 967 Gene3D Ribonuclease Inhibitor 133 201 IPR032675 -
Mibi07g1494 967 FunFam MDIS1-interacting receptor like kinase 2 772 965 - -
Mibi07g1494 967 PRINTS Leucine-rich repeat signature 174 187 - -
Mibi07g1494 967 PRINTS Leucine-rich repeat signature 467 480 - -
Mibi07g1494 967 Pfam Protein kinase domain 694 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1494 967 Pfam Leucine rich repeat 372 432 IPR001611 GO:0005515
Mibi07g1494 967 SUPERFAMILY L domain-like 87 410 - -
Mibi07g1494 967 Gene3D Phosphorylase Kinase; domain 1 653 771 - -
Mibi07g1494 967 FunFam Leucine-rich repeat receptor protein kinase EMS1 221 319 - -
Mibi07g1494 967 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Mibi07g1494 967 FunFam Leucine-rich repeat receptor protein kinase MSP1 654 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1494 Mibi-ChrMibi07 26980198 26984226 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1494 51 869 Receptor kinase-like Gene Family AT4G08850 41.394 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi07g1494 Pkinase 1e-47 CL0016