Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1489 ATGGACAAGCATAGAGTTGATGCTAACATTGCAGTTCAAGCTACATTTGTTGTTTCCTTGGTCCTTTGTGTGGTAATTTCAGGAGAGACAGAAACAGAGGCACTTCTAAAGTGCAAAGAAAGTCTTCCAGATCAACCAATTCTGGAGTTATGGGTCTGTCCAGCACAGAACTCAAGTGCAGCTCAAAGCCCATGTTCATGGCGTGGAATAACATGTGACAATTCCTCAGGAAGTGTGATTGCAATAAACTTGGCTTACACTGGCCTTCAAGGTACCCTCCAAGACTTGAACTTCTCTGCATTTCCTAATCTTCTCCGCCTTGATCTCAAAACAAACAACCTCATTGCGGATCTTAGCAAGCTGAAAAATTTCATCAGCTTGAATATCTCTCACAACAATCTATCTGGTTCTATCCCAGACTCCCTTGATGAAATGTTGAGTTTGTCAAGCATCAACCTCTCCTACAACAATTTGGAGGGTCCTGTACCCAATAAGGGCATATTCAATTCTTCCAATCCAGTGGATATACGTAACAACAAAGAATTATGTGGGAATATACAAGGCCTAAAACCTTGTAATGTCTCATACACGGAACCTGGAGGTGGGAGCAACAGAAAGACAATTATAGCAGCCACTGTTGCTTCTTTGGGAGGTGCACTGCTTGTTTCATCAGTGTTAGTTTGCATTTTGTTTTTGGCTGCACATATGGCTATGCAGCTCCAGCTTGCATACACAAAAGCAGTGACTGAAAAATGTGATGTATTTAGCTTCGGTGTTTTGGCTTTTGAGATTCTCGCAGGAAAGCATCCAGGAGATCTAATTTCTCAAATGCAAACATATGGTGTTCAAAACTTCAACTTCAAAGAGATCTTAGACCCACGTATTTCACCTCCTACAGAGCAAGAAAAATTGAAAGAATTGGCTTTGATTAGTAATTTGGCTATTTCTTGTTTACAAACAAACCCTCAATCACGACCAACTATGCGAAGCATAACACACATGATTGACGTGGAGACAGCTCAAAGTTCATGA 1032 0.4099 MDKHRVDANIAVQATFVVSLVLCVVISGETETEALLKCKESLPDQPILELWVCPAQNSSAAQSPCSWRGITCDNSSGSVIAINLAYTGLQGTLQDLNFSAFPNLLRLDLKTNNLIADLSKLKNFISLNISHNNLSGSIPDSLDEMLSLSSINLSYNNLEGPVPNKGIFNSSNPVDIRNNKELCGNIQGLKPCNVSYTEPGGGSNRKTIIAATVASLGGALLVSSVLVCILFLAAHMAMQLQLAYTKAVTEKCDVFSFGVLAFEILAGKHPGDLISQMQTYGVQNFNFKEILDPRISPPTEQEKLKELALISNLAISCLQTNPQSRPTMRSITHMIDVETAQSS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1489 343 Gene3D Ribonuclease Inhibitor 23 115 IPR032675 -
Mibi07g1489 343 Gene3D Ribonuclease Inhibitor 116 198 IPR032675 -
Mibi07g1489 343 Gene3D Transferase(Phosphotransferase) domain 1 202 342 - -
Mibi07g1489 343 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Mibi07g1489 343 FunFam Nuclear pore complex protein NUP107 28 188 - -
Mibi07g1489 343 SUPERFAMILY Protein kinase-like (PK-like) 244 334 IPR011009 -
Mibi07g1489 343 Pfam Protein tyrosine and serine/threonine kinase 245 334 IPR001245 GO:0004672|GO:0006468
Mibi07g1489 343 SUPERFAMILY L domain-like 53 180 - -
Mibi07g1489 343 PANTHER LEUCINE RICH REPEAT KINASE 2 81 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1489 Mibi-ChrMibi07 26660011 26663153 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1489 82 257 Receptor kinase-like Gene Family AT4G08850 33.152 1.52e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi07g1489 PK_Tyr_Ser-Thr 4.6e-08 CL0016