Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1473 ATGTGTCCTGCAAGGTCACGTCAAGAAGTTCATCCCCCTGCCCTTGACGCTTACCATGTCAACTCTAAAATCTGGCGAGCAATCGCTGGTGCAAACTTCCGAAGAATCCCTTCCGTTAATTCTATAGTTCATTATTTCCCTCAGGGCCATATCGAGCATGCTTCATCCCCTCTTCAATACCTCAACCCTCTCATCATCTACGAACCAATCATTCCCTGCCACGTCTCCGCTATGGAGTATCTCGCTGACCCTATCACCGACGAGGTTTACGTCAAGATTTCACTTGTTCCTATTATCAATGATAATAACGGCTCTGATCGTTTTACCAATTCCGTGGAAGCACCTAACGATGATGAAACGGCACTGTCGTTTTCTAAGGTTCTTACGCCTTCTGACGCCAACAATGGCGGTGGATTCTCTGTTCCTAGGCAATGTGCTGACACCATATTTCCGCCTTTAAACTTTGGGGTTGACCGGCCGTTCCATACATTGAAGGTGACGGATGTTTTGGGGACAGAGTGGGATTTTCGCCACATTTTTCGGGGCACACCAAAGAGGCACTTGCTCACTACTGGATGGAGTAAGTTTGTGAATAACAAGAACTTGATTGCTGATGATTCGGTGATTTTTGTTAAGGATTCCAATGGGGCCTTATTCGTTGGGGTTCGTAGAGCTTTCAAAACTCCGAAATTGATTGTTGTCGATTCCTCCATGTGGGATCCCAAGAAAAAGGATGAAAGGGAGAAGCATGTGGAATCCCATAGAGTGAAAAAAGGGACGTTTTCAAGGAACGGGAAGGGGAGATTGTCGGCGAATGAGGTTTCTGATGCTATAGAATTGGCTGTGCAAAACAAGCCATTTGAGGTTGTGTATTATCCTAGGTTGGGCTGGGCGGACTTTGTGGTAAAGGCAGAAGATGTGGAGAAAAGTTGGAATGTTGAATGGACTTCTGGAATGAGAGTTAAAATGGCAATGGAGATAGAGGCAACGTCCAAGACCACATGGCATCAGGGGACTGTAACTTCTATAGTTCCTCCTGATAATGGGCTTTGGATGGGTTCTCCATGGCGTAAGCTTCAGGTTTTGTGGGATGAACCTGACGTCATGCATACTGCAGAGCGAGTGAGCCCCTGGGAGGTTGAACCTGTTACGTTTGCAATTCCCCATAATGTAGCATTTCCTCCTGCAAAAAGGTTTAGAGCTGCTCAGAATTTTGGGGTAGCTACTGTTAGAGAGGGAGACCCCTTCTTTTCTATTTTAGATTTGGGCAATCCAACAATGGGGCACTTCAACCAATCATTGTTGAATTACAATATTGTTCCTGCTGCCATGCAGGGAGCCAGGCAAGATTTATCAAGTCTCTCCAACTTCGAAATTGGTAATCATCATCCGTATATCGGTAATACATTTGGGAACATGGTACCAAAGATGAGAACTTTGATGCCAACAGAGCCAAATGCTGACAATTGTCAATCTAATAGCTTGTCACCAAAAAGCAAGAGTAGTTTGCATGCTACAGGCACAGAATTTGCTGGGACACGAGGATGCAACTTAACAAGACGAGGTGTAAAGTCAATTCGGTTGTTCGGTAAGGTCATCGAAGTGGAACAGCCCACTGAAAGTGAGTGCACAGGAGATGAGGGTAATAATGGCTGGAAGGAGACTGAAGGCGTTGACCAATGA 1683 0.4551 MCPARSRQEVHPPALDAYHVNSKIWRAIAGANFRRIPSVNSIVHYFPQGHIEHASSPLQYLNPLIIYEPIIPCHVSAMEYLADPITDEVYVKISLVPIINDNNGSDRFTNSVEAPNDDETALSFSKVLTPSDANNGGGFSVPRQCADTIFPPLNFGVDRPFHTLKVTDVLGTEWDFRHIFRGTPKRHLLTTGWSKFVNNKNLIADDSVIFVKDSNGALFVGVRRAFKTPKLIVVDSSMWDPKKKDEREKHVESHRVKKGTFSRNGKGRLSANEVSDAIELAVQNKPFEVVYYPRLGWADFVVKAEDVEKSWNVEWTSGMRVKMAMEIEATSKTTWHQGTVTSIVPPDNGLWMGSPWRKLQVLWDEPDVMHTAERVSPWEVEPVTFAIPHNVAFPPAKRFRAAQNFGVATVREGDPFFSILDLGNPTMGHFNQSLLNYNIVPAAMQGARQDLSSLSNFEIGNHHPYIGNTFGNMVPKMRTLMPTEPNADNCQSNSLSPKSKSSLHATGTEFAGTRGCNLTRRGVKSIRLFGKVIEVEQPTESECTGDEGNNGWKETEGVDQ 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1473 560 MobiDBLite consensus disorder prediction 538 560 - -
Mibi07g1473 560 Pfam B3 DNA binding domain 124 224 IPR003340 GO:0003677
Mibi07g1473 560 ProSiteProfiles B3 DNA-binding domain profile. 124 226 IPR003340 GO:0003677
Mibi07g1473 560 CDD B3_DNA 123 224 IPR003340 GO:0003677
Mibi07g1473 560 FunFam Auxin response factor 122 226 - -
Mibi07g1473 560 Pfam Auxin response factor 277 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mibi07g1473 560 Gene3D - 315 387 - -
Mibi07g1473 560 MobiDBLite consensus disorder prediction 486 505 - -
Mibi07g1473 560 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 541 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi07g1473 560 SUPERFAMILY DNA-binding pseudobarrel domain 122 225 IPR015300 -
Mibi07g1473 560 Gene3D - 122 226 IPR015300 -
Mibi07g1473 560 SMART B3_2 124 226 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1473 Mibi-ChrMibi07 25724967 25727400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1473 10 541 B3 DNA Binding Superfamily AT1G77850 43.194 2.69e-138 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi07g1473 B3 3.6e-19 CL0405