Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1409 ATGGCTTCCGTAGCATCATCCACAGTTCTATTACACAACACCACTCTCTCACGATATCAACGATCAACCACATTCTTTTCACTCCATAGCTCCACTTCTTCTAGAGCTCTGCTTCTTCCAATTCGAGCCTCTCAGACTTCAGAGGAGCCTCGCCAGCGCAAGAAAGCACCCCCTGGTGTTGACACCAGGATCCATTGGGACAACGAAGATGAAGGTTGGGTTGGAGGCACTTCTAGTAGTAGTAGTACTAAACAATCCAAACCTGAGGATGTTCTTGGCCAAAATTTTGCTGATTTGCTTTCTGATTTTTCTGGCTCTCACTATGAATTTTTAGGAGTTTCAGCAGAAGCTGATTTAGAAGAGATCAAAGCAGCTTATAGGAGATTATCAAAGGAATACCACCCAGACACAACCTCACTCCCTCTAAAAACTGCCTCAGACAAATTCATGAAGTTGAGAGAAGTGTACAATGTCCTGAGCAATGAAAAGAGCCGAAAATTCTATGACTGGACGCTTCTCCAAGAGGCGGCAAGCAGGCAATCAGAGAAGATGAAGATGAGATTGGAGGATCCTTTTGAGCGAGATGTGAAGAACTGGGAATCTGTTCCAGACATGGTTGATCGTCTTGGAGGAAGGAACATGAAGCTCAGTGATCAAGCAGTCACTGCTCTCACTGTTGATGTTTTCATCATTATCTTTGCTATTTGCTGCATCATTTATGTAATATATTTCAAAGAACCATATTACTAG 750 0.4307 MASVASSTVLLHNTTLSRYQRSTTFFSLHSSTSSRALLLPIRASQTSEEPRQRKKAPPGVDTRIHWDNEDEGWVGGTSSSSSTKQSKPEDVLGQNFADLLSDFSGSHYEFLGVSAEADLEEIKAAYRRLSKEYHPDTTSLPLKTASDKFMKLREVYNVLSNEKSRKFYDWTLLQEAASRQSEKMKMRLEDPFERDVKNWESVPDMVDRLGGRNMKLSDQAVTALTVDVFIIIFAICCIIYVIYFKEPYY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1409 249 Gene3D DnaJ domain 98 191 IPR036869 -
Mibi07g1409 249 MobiDBLite consensus disorder prediction 39 89 - -
Mibi07g1409 249 MobiDBLite consensus disorder prediction 47 70 - -
Mibi07g1409 249 SMART dnaj_3 105 164 IPR001623 -
Mibi07g1409 249 PRINTS DnaJ domain signature 126 141 IPR001623 -
Mibi07g1409 249 PRINTS DnaJ domain signature 108 126 IPR001623 -
Mibi07g1409 249 PRINTS DnaJ domain signature 144 164 IPR001623 -
Mibi07g1409 249 FunFam DnaJ homolog subfamily C member 4 95 193 - -
Mibi07g1409 249 ProSiteProfiles dnaJ domain profile. 106 172 IPR001623 -
Mibi07g1409 249 Pfam DnaJ domain 107 169 IPR001623 -
Mibi07g1409 249 MobiDBLite consensus disorder prediction 73 89 - -
Mibi07g1409 249 Coils Coil 112 132 - -
Mibi07g1409 249 CDD DnaJ 107 161 IPR001623 -
Mibi07g1409 249 SUPERFAMILY Chaperone J-domain 106 175 IPR036869 -
Mibi07g1409 249 ProSitePatterns Nt-dnaJ domain signature. 149 168 IPR018253 -
Mibi07g1409 249 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 10 248 IPR044618 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1409 Mibi-ChrMibi07 23111952 23114534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1409 107 169 C2H2 Transcription Factor Family AT1G74250 41.791 7.83e-09 53.9