Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1377 ATGGTCAGTCTGAAGGAAGAAAGCTTGGGAAGCGATTCGCAATTCGTGAACCCGCCTGGGGTTGGTCCCAATGCATCAAGAACCCATGTTACACCTAATCATCAACACTCTGCGACTAGAAGATTTTTGTCTGCCATTAGAGACTATCCTCCATTTTGTGGACCTAATGCTCTTAGTCGCAAGGGAGATTTTTTCAAGGGCAAGCTCAAGGACAGGCATTTGAGTGGTGGTATGGAAGAAAATAAGAGAAAACTTGATTGCCTCACACAGTGTGATGGGTCTAAAGCTGTATTGAGCACTAAAGGCTCTCTGAATCATTCCAAGATGAAGGTTTTGAAAAAGAAAGAAGGAAATACTGCTTCTGAATCTATGGAAGGCTCTCTGATTCATTCCAAGATGAAGGCTTTGGAAAAGAAAGAAGGAAATGCTGCTTCTGGATCTATGGAAGGCTCTCTGATTCATTCCAAGATGAAGGTTTTGGAAAAGAAAGAAGGAAATGCTGCTTCTGGATTTATGGAAGGCTCTCTAAATCATTCCAAGATGAAGATTTTGAAAAAGGAAAAAGTAAATGCTGCTTCTGGATCTATGGGTAGATTTGAAGCTTTAGGGAAAAATGGCCATGGTACCAATTACAGTAGAAAATTTTCTGATGGCCAGAGATCATATGGTGTAAATGTTCTACTTTTGCATCATCGTAGTTTGAGCATTCGCAACAATCACTCAATCGTGACACGGAATACTGTAAGAGACACATTGCGTATGTTCCAAGCTCTTTGTAGAAAATTGTTGCAAGAAGTAGAAGCCAAGTCAAAAGGCAAAGCAAAAGAACATCGGAGGATTGATTTAGAGGCAGCAAAGTTCCTCAGGAATGAAGGAAATTTTGTAAATGAAGGCAAGCAGATCTTTGGTTCTGTTCCTGGGGTTGAAGTAGGTGATGAATTTGATTATAGGGTGGAACTTAATATTGTTGGTCTTCATCGCCAAACACAAGCTGGCATAGATTTTGCCAGGGTCCATGGTGAGAATCTGGCATCTAGTATTGTTGCCTCTGGTGGATACAGTGATGAGTTGGATAAGTCAGGTGTTTTGATTTATTCTGGGCATGGTGGGAATGTAATGTCCAGAAAGAAAAAACCTGTAGACCAGAAGCTTGAGCGGGGTAACCTTGCTTTGAAGAACAGTATCAAGAGAAAGAATCCTGTTAGAGTGATACGCAGTGCTTCCTCCCGAGATGGAAGTCGTAAGAGATTTGTGTACGATGGATTATATGAAGTGGAGAAATATTGGCAAGAAATGGGGGAGCATGGCAAGATGATTTTCAAGTTTCAGCTACGAAGAATCCCAAATCAAGCAGAACTTCCTTGGATTGGACTGAAGAATTCCAAAATGTTCACTTTAAAGAAGGGTTTGTGTGTTCTTGACATCTCACATGGTAAAGAGGCATTACCAATTCGTGCTGTGAACACCATAGATGATGAAAAACCACTATCTTTTGAATATATCAATGGGATGATCTGCCCTGATTGGTTGCATCCAACGCCTACTAAGGGATGTAACTGTACCGACAGATGCTCTGACCCAACAAGATGTTCTTGTGCTGTTAAAAATGGAGGAATTCCATTCAATCACACAGGATGTATTGTAGAAGTAAAGCCTCTTGTCTATGAGTGTGGCCCTTATTGCAAATGCCTTCCAGATTGCTATAGCAGAGTCAGCCAACATGGCATAAAATTGCCACTTGAAATTTATAAAACTGACAAAAGGGGATGGGGTGTGAGATCTCTATGCTCCATCCCTTCTGGAAGTTTTGTATGTGAATACATAGGAGAGTTGCTTGAAGACAGGGAAGCTGAACAAAGAACCGGTCATGATGAGTATCTGTTTGACGTAGGTAATAACTTGATCAATTATGGCATACTCTCTGATGGAGTTTCTAGGCCTGAAGTGTCTGAGGGTGGCGGTGGCTTCACCATTGATGCAGCTCGGTATGGTAACCTGGGAAGATTTTTCAACCATAGTTGCGCGCCTAATATGTATGCACAAAATGTTCTGTACGATCATGGCGACCATAGGATTCCTCACATAATGCTGTTTGCTGCTGAGAACATTCCTCCTTTAAAAGAGCTGACTTATGATTACAATTACTCAAAAGGTCAAATCTTGAATTCTGACGGCAGCATAAAGAAGAAGGATTGCTTTTGCGGCTCCGTGGGATGTACTGGAAGGATGTATTGA 2235 0.4143 MVSLKEESLGSDSQFVNPPGVGPNASRTHVTPNHQHSATRRFLSAIRDYPPFCGPNALSRKGDFFKGKLKDRHLSGGMEENKRKLDCLTQCDGSKAVLSTKGSLNHSKMKVLKKKEGNTASESMEGSLIHSKMKALEKKEGNAASGSMEGSLIHSKMKVLEKKEGNAASGFMEGSLNHSKMKILKKEKVNAASGSMGRFEALGKNGHGTNYSRKFSDGQRSYGVNVLLLHHRSLSIRNNHSIVTRNTVRDTLRMFQALCRKLLQEVEAKSKGKAKEHRRIDLEAAKFLRNEGNFVNEGKQIFGSVPGVEVGDEFDYRVELNIVGLHRQTQAGIDFARVHGENLASSIVASGGYSDELDKSGVLIYSGHGGNVMSRKKKPVDQKLERGNLALKNSIKRKNPVRVIRSASSRDGSRKRFVYDGLYEVEKYWQEMGEHGKMIFKFQLRRIPNQAELPWIGLKNSKMFTLKKGLCVLDISHGKEALPIRAVNTIDDEKPLSFEYINGMICPDWLHPTPTKGCNCTDRCSDPTRCSCAVKNGGIPFNHTGCIVEVKPLVYECGPYCKCLPDCYSRVSQHGIKLPLEIYKTDKRGWGVRSLCSIPSGSFVCEYIGELLEDREAEQRTGHDEYLFDVGNNLINYGILSDGVSRPEVSEGGGGFTIDAARYGNLGRFFNHSCAPNMYAQNVLYDHGDHRIPHIMLFAAENIPPLKELTYDYNYSKGQILNSDGSIKKKDCFCGSVGCTGRMY 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1377 744 Pfam SET domain 589 714 IPR001214 GO:0005515
Mibi07g1377 744 ProSiteProfiles YDG domain profile. 303 446 IPR003105 -
Mibi07g1377 744 SMART set_7 578 720 IPR001214 GO:0005515
Mibi07g1377 744 ProSiteProfiles Pre-SET domain profile. 516 575 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi07g1377 744 SMART G9a_1 298 450 IPR003105 -
Mibi07g1377 744 Gene3D - 286 466 IPR036987 -
Mibi07g1377 744 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 74 736 - -
Mibi07g1377 744 SUPERFAMILY SET domain 462 721 IPR046341 -
Mibi07g1377 744 ProSiteProfiles Post-SET domain profile. 728 744 IPR003616 -
Mibi07g1377 744 SMART PostSET_3 728 744 IPR003616 -
Mibi07g1377 744 ProSiteProfiles SET domain profile. 578 714 IPR001214 GO:0005515
Mibi07g1377 744 SMART preset_2 472 562 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi07g1377 744 Pfam Pre-SET motif 475 570 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi07g1377 744 SUPERFAMILY PUA domain-like 289 459 IPR015947 -
Mibi07g1377 744 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 167 744 IPR025794 GO:0016571
Mibi07g1377 744 Pfam SAD/SRA domain 302 450 IPR003105 -
Mibi07g1377 744 MobiDBLite consensus disorder prediction 1 36 - -
Mibi07g1377 744 Gene3D SET domain 467 744 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1377 Mibi-ChrMibi07 22705012 22707246 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1377 299 744 EF-hand Containing Proteins AT5G13960 38.923 6.34e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi07g1377 SAD_SRA 1e-49 CL0178