Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1376 ATGCTCGCCATTTTCGGCGCTCACACTACAGTGTCTTCTTCGACACTCACAACGGCCCTCTGCTTCACACTTACAATGGCTACATCGACATCTGTTCTTGACGTTCAGTCTGAAGAAAAATTCATGAGGAGGCTATCTGTGATTCGTGATTACCCGCCTGGGGTTGGACGGACTGGAATATTTCTTCCTGCAAGAAGAGTTTCAGCCATTAGAGACTATCCTCCATTTTGTGGCCCTAATGCTATGATTCTGAGTCTCCACCGCAATTTACAGGCTGGCATAGATTTTGCAGTGCGCAATGGTGAGCATCTTGCAACTAGTATTGTTGCATCTGGGGGTTACAATGATGAGTTGGATGATTCAGGCGTTTTGATTTATTCAGGGCAAGGTGGGAATGTGATGTCCAGAAAGAAAGAACCTGAAGACCAGAAGCTTGAGCGAGGTAATCTAGCTTTGAAGAACAGCAGCAAGAGAAAGAATCCCGTTAGAGTGACACGCTGTGCTTTCTTTGGGGATGGAAGTCGTAAGAGATTTGTGTATGATGGATTGTATGAAGTTGAGACATACTGGAAAGAAATGGGGCCACATGGCAAGATGGTGTTCAAGTTTCAGCTGCGAAGAATCCCAAATCAACCAGAGCTTCCTTGGATTGAACTGAAGAATTCCAAGACGTTCACATTAAAAAAGGGTTTGTGTGTTGCTGACATCTCACGTGGTAAAGAGGCATTACCAATTCGTGTTGTCAACACTATAGATAACGAAAAACCACCATCTTTTGAATATATCACTAAGATGATCTACCCTGATTGGTTGCATCCAACATCTGCTAAGGGATGTAACTGTACTGACCGGTGCTCTGACCCTACAAGATGTTCTTGTGCGGTTAAAAATGGAGGAATCCCATTCAATCACACAGGGCGTATTGTAGAGGTAAAGCCTCTAGTCTATGAGTGTGGCCCTTCTTGCAAATGCCCTCCAGATTGCTACAACAGAGTCAGCCAACATGGCATAAAATTCCCACTTGAAATTTATAAAACTGACAAAAGGGGATGGGGTGTGAGATCTTTACGCTCCATTCCTTCTGGTAGTTTTGTGTGTGAATACATAGGAGAGTTGCTTGAAGATAAGGAAGCTGAAGAGAGAATTGATCATGATGAGTATCTGTTTGATATAGGTAATAACTTGATCAACATTGGCATACCTTCTAATGGACTCTCCAGGCCTGAAGTCCCCGAGGGAGGGGGAGACGGCGGTGGCTTCACCATTGATGCAGCTCGGTATGGTAATCTGGGAAGATTTTTCAACCATAGTTGCGCCCCTAATATGTATGCACAAAATGTTCTGTATGATCATGGTGACAGCAGGATTCCTCATATAATGTTGTTTGCTGCTGAGAACATTCCTCCATTAAAGGAGCTGACTTATGATTACAATTACTCAAAAGATAAAATCTATGATTCTAATGGCAACATAAAGAAGAAGGATTGCTTTTGCGGCTCCGTGGGGTGTACTGGAAGGATGTATTGA 1527 0.4342 MLAIFGAHTTVSSSTLTTALCFTLTMATSTSVLDVQSEEKFMRRLSVIRDYPPGVGRTGIFLPARRVSAIRDYPPFCGPNAMILSLHRNLQAGIDFAVRNGEHLATSIVASGGYNDELDDSGVLIYSGQGGNVMSRKKEPEDQKLERGNLALKNSSKRKNPVRVTRCAFFGDGSRKRFVYDGLYEVETYWKEMGPHGKMVFKFQLRRIPNQPELPWIELKNSKTFTLKKGLCVADISRGKEALPIRVVNTIDNEKPPSFEYITKMIYPDWLHPTSAKGCNCTDRCSDPTRCSCAVKNGGIPFNHTGRIVEVKPLVYECGPSCKCPPDCYNRVSQHGIKFPLEIYKTDKRGWGVRSLRSIPSGSFVCEYIGELLEDKEAEERIDHDEYLFDIGNNLINIGIPSNGLSRPEVPEGGGDGGGFTIDAARYGNLGRFFNHSCAPNMYAQNVLYDHGDSRIPHIMLFAAENIPPLKELTYDYNYSKDKIYDSNGNIKKKDCFCGSVGCTGRMY 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1376 508 Pfam SET domain 350 478 IPR001214 GO:0005515
Mibi07g1376 508 SUPERFAMILY SET domain 222 485 IPR046341 -
Mibi07g1376 508 Pfam SAD/SRA domain 82 211 IPR003105 -
Mibi07g1376 508 Gene3D SET domain 229 508 IPR046341 -
Mibi07g1376 508 ProSiteProfiles SET domain profile. 339 478 IPR001214 GO:0005515
Mibi07g1376 508 ProSiteProfiles Pre-SET domain profile. 277 336 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi07g1376 508 SMART G9a_1 63 211 IPR003105 -
Mibi07g1376 508 SMART set_7 339 484 IPR001214 GO:0005515
Mibi07g1376 508 SMART PostSET_3 492 508 IPR003616 -
Mibi07g1376 508 ProSiteProfiles Post-SET domain profile. 492 508 IPR003616 -
Mibi07g1376 508 SMART preset_2 233 323 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi07g1376 508 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 75 500 - -
Mibi07g1376 508 SUPERFAMILY PUA domain-like 81 220 IPR015947 -
Mibi07g1376 508 Pfam Pre-SET motif 236 331 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi07g1376 508 Gene3D - 80 228 IPR036987 -
Mibi07g1376 508 ProSiteProfiles YDG domain profile. 64 207 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1376 Mibi-ChrMibi07 22688810 22691462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1376 84 508 EF-hand Containing Proteins AT5G13960 39.348 1.74e-103 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi07g1376 SAD_SRA 2.7e-38 CL0178