Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1375 ATGTTTCTGCATAGAAACTCCATAGCTTCACTGTTCGTGATTCCCATTATTGCTGTTTTTGCATATTTCATTGTCGTACATGAGACTGATCTTGTGGGTGGTTTATTGTCATCCCCATTCTCTTTAAGTCGTCGTCACCACCACCACCATCATCATTCCCACAAGAAACGACCTGATGACGGTGAGATTGCTAGCAATATGTGTGATGACTTTCCACCGGGAATTCCGCCACCGAATACCAACACGACAACATATCTATGTGTGGATCGACGAGGTTGCTGCAACTTCACCACCGTGCAAGCAGCTGTAAATGCTGTCCCAGATTTCAGCGATAAAAGAAACATCATATGGATTAACAGTGGCCTTTACTATGAGAAAGTGATGGTGCCAAAAAGCAAACCAAACATCACATTTGAAGGACAAGGCTTCACTTCAACGGCAATTGCATGGAACGACACAGCCAAGTCAGCAAACGGTACATTCTATAGTGGCTCCGTGCAAGTCTTCGCTTCCAACTTTATTGCCAAAAACATAAGCTTCATGAATGTGGCGCCAATTCCAGGTCCAGGGGTGGATGGAGCACAAGCAGTGGCAATAAGAGTAGGGGCTGATCAGGCTCAGTTCTGGGGATGTGGGTTTTTTGGAGCACAAGATACCCTTCATGATGATAAGGGTCGCCACTACTTCAGGGATTGTTATATCCAAGGCTCCATTGATTTCATCTTTGGCAATGCAAGGTCTCTCTATGAGAATTGTCAACTAGTGTCAATGGCGAACCCAGTACCGGCAGGACAAAAGTTCATAAACGGCGCCGTTACAGCTCATGGGAGGACATCAAACGACGAAAACACAGGCTTTGCTTTTGTCAACTGTAGTATCGGAGGCTACGGAAGAATATGGTTAGGTCGGGCATGGCGTCCTTTCTCTCGTGTCGTTTTTGCCTTTACGACAATGTCTGATATCATTACCCCTGAAGGTTGGACCGACCTCAATGACCCTGCCAGAGATCAGACAATATTCTATGGAGAATACAACTGCACAGGGCCAGGGGCCAGCATGAATTTGAGGGCACCATATGTACAGAGATTAAATGATACAATTGCGTCCACTTTCCTTAACACATCATTTATTGATGGAGACCAATGGTTATTCCCTCCCAAGTAA 1164 0.4545 MFLHRNSIASLFVIPIIAVFAYFIVVHETDLVGGLLSSPFSLSRRHHHHHHHSHKKRPDDGEIASNMCDDFPPGIPPPNTNTTTYLCVDRRGCCNFTTVQAAVNAVPDFSDKRNIIWINSGLYYEKVMVPKSKPNITFEGQGFTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNVAPIPGPGVDGAQAVAIRVGADQAQFWGCGFFGAQDTLHDDKGRHYFRDCYIQGSIDFIFGNARSLYENCQLVSMANPVPAGQKFINGAVTAHGRTSNDENTGFAFVNCSIGGYGRIWLGRAWRPFSRVVFAFTTMSDIITPEGWTDLNDPARDQTIFYGEYNCTGPGASMNLRAPYVQRLNDTIASTFLNTSFIDGDQWLFPPK 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1375 387 Pfam Pectinesterase 88 380 IPR000070 GO:0030599|GO:0042545
Mibi07g1375 387 ProSitePatterns Pectinesterase signature 2. 234 243 IPR033131 -
Mibi07g1375 387 SUPERFAMILY Pectin lyase-like 84 384 IPR011050 -
Mibi07g1375 387 FunFam Pectinesterase 80 387 - -
Mibi07g1375 387 MobiDBLite consensus disorder prediction 47 75 - -
Mibi07g1375 387 Gene3D - 79 385 IPR012334 -
Mibi07g1375 387 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 74 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1375 Mibi-ChrMibi07 22675186 22677882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1375 57 383 Carbohydrate Esterase AT1G05310 70.642 0.0 515