Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1373 ATGGAAGAAGAAGGTAACAACGTCACACAAGGATGTGCCATGGATTCTCCAAAACCGGCTCCGTTATCATCGTCATACCGGGGAGTTAGGAAGCGAAAATGGGGCAAATGGGTGTCGGAAATCCGTGAGCCAGGCAAGAAAACTCGAATATGGTTAGGAAGCTATGAGACACCAGAAATGGCGGCTGCAGCATATGATGTGGCGGCCTCACACTTCAGGGGACAGTCGGCTCGGCTTAACTTCCCGGAGCTCGGCGCAGTTTTTCCGAAGCCGGCTAGCTCCGGACCGGAGGATGTCCGGCAGGCGGCTCAACAAGCTGCATTGATGATGAGGAGACCTAATAATTTGAGGTGTCAATCATCGACGGTGGTGGAAGATGGCGGCGGTGTGGGCCCGTCGACGGTGGAGCTGACGCCGAGCCAGATTGAGGCCATCAATGAGTGGCCATTGGATTCACCAAAGATGTGGATGCAAATGGCTGAAGCTTTTGAAATCTCAGGGCTTGATGATAGGTCCATGGCATTTTATCATGATGATGATAATAATAATGATGATGATATTAATAATGAGGATGATCGATTATTGGAATTCACAAGTTGGGATGAAAAAGAGGATGATTCTATATGGCATTTCTAA 636 0.489 MEEEGNNVTQGCAMDSPKPAPLSSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYETPEMAAAAYDVAASHFRGQSARLNFPELGAVFPKPASSGPEDVRQAAQQAALMMRRPNNLRCQSSTVVEDGGGVGPSTVELTPSQIEAINEWPLDSPKMWMQMAEAFEISGLDDRSMAFYHDDDNNNDDDINNEDDRLLEFTSWDEKEDDSIWHF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1373 211 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Mibi07g1373 211 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Mibi07g1373 211 MobiDBLite consensus disorder prediction 1 27 - -
Mibi07g1373 211 Pfam AP2 domain 25 74 IPR001471 GO:0003700|GO:0006355
Mibi07g1373 211 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Mibi07g1373 211 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Mibi07g1373 211 CDD AP2 24 84 IPR001471 GO:0003700|GO:0006355
Mibi07g1373 211 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 23 145 - -
Mibi07g1373 211 FunFam Ethylene-responsive transcription factor 2 24 83 - -
Mibi07g1373 211 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Mibi07g1373 211 Gene3D AP2/ERF domain 25 83 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1373 Mibi-ChrMibi07 22645338 22645973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1373 24 158 AP2-EREBP Transcription Factor Family AT1G71450 56.296 8.73e-48 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi07g1373 AP2 1.7e-13 CL0081