Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1360 ATGAGTTGCAGCTCCGGCGACAACAACAATGGAAGCAGCAGCTTCAATGGCAGGGAAAGTGATGTCAAGTACAAGGGAGTCCGGCGACGTAAATGGGGCAAATGGGTATCGGAAATTCGTGTCCCGGGATCGAAAGAGAGGTTATGGCTCGGCACTTATGGGTCGCCGGAGGCGGCTGCGGTGGCGCATGACGTGGCATTCTATTGCCTGAGGTGGCCGGCCACATTGGAGAAGCTAAACCTGCCGGAGATGTTGCCGGCTTATTGTCACGAATGGCGGCACCGGGAGATGTCGCCGGGGTCGGTGCAGGAGGCGGCGTCGAACGCCGGGATGGCGGTGGATGCGAAGAGGATTGTGGAAGAAGAGACAGAGAAGAATGAGAGGATTGATGAGGAAAACAGAGGAAACAGAGGAATGAATGATTATGATGATGGGTTTTGGTGGGATTGGGATGGTGATGATGGTAGCGGCGGAAGCGGCGGAGATGACGGCGGTTTATGGCGAGGAAGCGGCGGAGGAGGAGGAGATTCGAGCATTTCAGTTGATGATTATTTTGTGGATGTTCAATAA 570 0.5456 MSCSSGDNNNGSSSFNGRESDVKYKGVRRRKWGKWVSEIRVPGSKERLWLGTYGSPEAAAVAHDVAFYCLRWPATLEKLNLPEMLPAYCHEWRHREMSPGSVQEAASNAGMAVDAKRIVEEETEKNERIDEENRGNRGMNDYDDGFWWDWDGDDGSGGSGGDDGGLWRGSGGGGGDSSISVDDYFVDVQ 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1360 189 Gene3D AP2/ERF domain 22 83 IPR036955 GO:0003700|GO:0006355
Mibi07g1360 189 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 18 124 - -
Mibi07g1360 189 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Mibi07g1360 189 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Mibi07g1360 189 ProSiteProfiles AP2/ERF domain profile. 23 82 IPR001471 GO:0003700|GO:0006355
Mibi07g1360 189 CDD AP2 23 83 IPR001471 GO:0003700|GO:0006355
Mibi07g1360 189 MobiDBLite consensus disorder prediction 148 189 - -
Mibi07g1360 189 Coils Coil 112 132 - -
Mibi07g1360 189 SMART rav1_2 23 88 IPR001471 GO:0003700|GO:0006355
Mibi07g1360 189 SUPERFAMILY DNA-binding domain 23 75 IPR016177 GO:0003677
Mibi07g1360 189 Pfam AP2 domain 23 70 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1360 Mibi-ChrMibi07 22251918 22252487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1360 19 115 AP2-EREBP Transcription Factor Family AT1G22810 62.245 3.31e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi07g1360 AP2 1.2e-11 CL0081