Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1359 ATGGGTTGCAGCAACAACAACAACAATGGAAGGGAGAACGATGTCATCAAGTACAAGGGAGTCCGGCGACGTAAATGGGGCAAATGGGTATCGGAGATTCGTGTTCCGGGCTCGAAAGAGAGGTTATGGCTCGGCACTTATGGGTCGCCGGAGGCAGCTGCGGTGGCGCATGACGTGGCATTCTATTGCCTGAGGAGGCCGGCCACATTGGAGAAGCTAAACCTGCCGGAGATGTTGCCGGCTTATTGTCACGAATGGCGGCACCGGGAGATGTCGCCGGGGTCGGTGCAGGAGGCGGCGTCGAACGCCGGGATGGCGGTGGATGCCAAGAGGATTGTGGAAGAAGAGACAGAGAAGAATGAGAGGATTGATGAGGAAAACAGAGGAAACAGAGGAATGAATGATTATGATGATGGGATTTGGTGGGATTGGGATGGTGATGATGGTAGCGGCGGAAGTGGCGGCGATGACGGCGGTTTATGGCCAGGAAGCTGCGGAGGAGATTCGAGCATTTCAGTTGATGATTATTTTGTGGATGTTCAACATTATTAA 552 0.5344 MGCSNNNNNGRENDVIKYKGVRRRKWGKWVSEIRVPGSKERLWLGTYGSPEAAAVAHDVAFYCLRRPATLEKLNLPEMLPAYCHEWRHREMSPGSVQEAASNAGMAVDAKRIVEEETEKNERIDEENRGNRGMNDYDDGIWWDWDGDDGSGGSGGDDGGLWPGSCGGDSSISVDDYFVDVQHY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1359 183 Gene3D AP2/ERF domain 16 77 IPR036955 GO:0003700|GO:0006355
Mibi07g1359 183 Coils Coil 106 126 - -
Mibi07g1359 183 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 119 - -
Mibi07g1359 183 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Mibi07g1359 183 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Mibi07g1359 183 ProSiteProfiles AP2/ERF domain profile. 17 76 IPR001471 GO:0003700|GO:0006355
Mibi07g1359 183 SMART rav1_2 17 82 IPR001471 GO:0003700|GO:0006355
Mibi07g1359 183 MobiDBLite consensus disorder prediction 144 165 - -
Mibi07g1359 183 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Mibi07g1359 183 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Mibi07g1359 183 SUPERFAMILY DNA-binding domain 17 70 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1359 Mibi-ChrMibi07 22245037 22245588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1359 12 109 AP2-EREBP Transcription Factor Family AT1G71520 61.000 4.52e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi07g1359 AP2 4.3e-12 CL0081