Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1336 ATGGGGACACGACCTCAGCAGCCGTGTCGAGAGGAAGAGGAGGATGAGCTGCTAGGTCCTGGAGCAACACTTTCTGGCCAGTCAATTTCCACTAGTAAAAGTGTAGGGTCACCATCCAGTCGGAGTGAGCAGACAATGGCTACACCACCCAGTGAAAAAACTTTTCTAAAATTAAATCAGCTTGACATCCACGGTGATGATGCTGGGTCTCAGGGAGCAGTTGCTAGCAAGAAGAAAAAGAGAGGGCAGCGTGCTGTTGGAGGTGACAAGAGTGGAAGAGGGCTCCGCCAATTTAGCATGAAAGTTTGCGAGAAGGTGGAAAGTAAGGGAAGAACCACTTACAATGAGGTTGCAGATGAACTTGTGGCTGAATTTTCTGAACCAAGCAGTAGCGTTTCAGCTCCTGATCAGCAACAATATGAAGAGAAAAATATTCGGCGAAGGGTTTATGATGCTTTGAATGTTCTCATGGCAATGGACATAATTTCTAAGGATAAAAAGGAAATTCAATGGAAGGGTCTCCCTCGTACAAGTCTGAATGATATTGAAGAATTCAAGAAAGAGCGCCTTCAGCTTAGGAATCGGATTGAAAAGAAAGCTGCCTACCTTCAGGAGCTGGAGGATCAATACATAGGTCTTCAGAATCTCATACAACGAAATGAGCAATTGTGTGGGTCAGGAAATGCTCCCAGTGGAGGGGTAGCCTTACCTTTTATTCTTGTACAGACTCGTCCCCATGCCACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTACATTTTGATTTCAATAGCACTCCTTTTGAGCTGCATGATGACAACTTTGTCCTCAAGGAAATGAAATTTTGTGAAAGACCCCAGAGTGATAATACGACGCCAAATCTTGCAGACGGGGGTGAAGGTTCTAGCATGTCAGGCTTGTATCAGGCGCAGGGCACTCCTTCAGCATCAAACCAACCGGTTATAACTCCAACCTCACCGCCTCTCCCTGGAATATTGAAGGCAAGAGTGAAGCATGAGCATTGA 1029 0.4548 MGTRPQQPCREEEEDELLGPGATLSGQSISTSKSVGSPSSRSEQTMATPPSEKTFLKLNQLDIHGDDAGSQGAVASKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFSEPSSSVSAPDQQQYEEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEEFKKERLQLRNRIEKKAAYLQELEDQYIGLQNLIQRNEQLCGSGNAPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNFVLKEMKFCERPQSDNTTPNLADGGEGSSMSGLYQAQGTPSASNQPVITPTSPPLPGILKARVKHEH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1336 342 CDD DP_DD 178 281 IPR014889 -
Mibi07g1336 342 FunFam Transcription factor-like protein DPB 85 178 - -
Mibi07g1336 342 MobiDBLite consensus disorder prediction 287 321 - -
Mibi07g1336 342 SUPERFAMILY "Winged helix" DNA-binding domain 93 174 IPR036390 -
Mibi07g1336 342 SMART E2F_TDP_2 90 173 IPR003316 GO:0005667|GO:0006355
Mibi07g1336 342 PIRSF Txn_factor_DP 5 342 IPR015648 GO:0005667|GO:0051726
Mibi07g1336 342 FunFam Transcription factor-like protein DPB 179 303 - -
Mibi07g1336 342 Gene3D - 85 178 IPR036388 -
Mibi07g1336 342 Coils Coil 189 223 - -
Mibi07g1336 342 SUPERFAMILY E2F-DP heterodimerization region 179 294 IPR037241 -
Mibi07g1336 342 MobiDBLite consensus disorder prediction 1 93 - -
Mibi07g1336 342 Gene3D Transcription factor DP 179 299 IPR038168 -
Mibi07g1336 342 MobiDBLite consensus disorder prediction 23 55 - -
Mibi07g1336 342 Pfam Transcription factor DP 181 293 IPR014889 -
Mibi07g1336 342 SMART DP_2 180 340 IPR014889 -
Mibi07g1336 342 MobiDBLite consensus disorder prediction 287 332 - -
Mibi07g1336 342 Pfam E2F/DP family winged-helix DNA-binding domain 93 173 IPR003316 GO:0005667|GO:0006355
Mibi07g1336 342 PANTHER TRANSCRIPTION FACTOR DP 22 295 IPR015648 GO:0005667|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1336 Mibi-ChrMibi07 21766258 21771902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1336 91 282 E2F-DP Transcription Factor Family AT5G02470 54.922 7.41e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mibi07g1336 DP 3.3e-41 No_clan