Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1330 ATGATAATGATAGACTATACTCCTGAGACACACCGAAAGCGAGCTACCAAAGGTGCACTCATCATCGACATTTGTTTGACCATTGTTAGGTGTGGATTCTTTCGAAGGAACAAGATTCCAATTTCTTCATCTTTTTATCGATTCTTCAATTTTCATGGTAAAATGATGAGGTTACAGACATATGCGGGGCTTAGTTTCATTGCAACTTTAGCTGTTACATATCATGCGTTTAATAGCAGAGGTCAATTTTATCCAGCAATGGTTTTTCTGTCGACTTCAAAGATCAGCTTGGTGCTTCTCCTAAACATGGGTCTAGTCATTATGTGCCTTTTATGGCAATTAACAAAGAGGGTGTTCCTTGGCACACTCCGAGAGGCAGAGGTTGAGAGGCTTAATGAGCAATCATGGAGGGAGGTTATGGAAATTCTCTTTGCCATCACTATTTTTAGGCAGGATTTCTCTGTTACATTCCTTGCTATGGTCACAGCACTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAAAGAGTTGAGTATATTGAGACTACTCCTACCGTGCCCTTGTTGTCTCATATTCGAATTGTGTCTTTTATGGGTTTCCTCCTCCTTCTGGATGGACTCTTTTTATATAGTTCCATGAAGCATTTGATACAATCATGGCAGGCTTCAGTTTCCCTCTTTTTTGCCTTTGAGTACATGATACTGGCAACAACAACAGTGTCAATTTTTGTAAAATATCTTTTCTATGTTAGTGACATGCTTATGGAAGGACAATGGGAAAAGAAACCAGTCTTCACATTTTACTTGGAACTCGTTAGGGATTTGCTTCACTTGTCTATGTACATGTGTTTCTTCCTTGTAATTTTCATAAATTATGGTGTGCCTTTGCACTTGATACGGGAGCTGTATGAGACATTTAGGAATTTCAAAGTTCGTGTTGCTGACTACATTCGTTATCGTAAGATTACTTCAAATATGAATGATCGGTTTCCAGATGCAACCCCTGAAGAGCTTGATGTAAGCGATGCTACTTGTATTATCTGTCGTGAAGAGATGACTACTGCCAAGAAACTTATATGTGGACATCTTTTTCATGTGCACTGCCTCCGATCATGGTTGGAGCGACAACATACTTGCCCTACCTGCAGAGCCTTGGTTGTACCACCTGAAAATGGGGCAACTACTGCTGGAGGGCAGCATGGATCACAGTCAGACCGACAGGGAGCAGGAACAGGTGCTGGAAGCTCAGCTCAAGCTGAAGCTGGCAGTGGGGCAGCTACTGATAATTTGAGTCGTCATCAAGCTAGACTCCGAGCTGCTGCTGCTGCTGCTTCAATGTATGAGAAGTCTTATGTATACCCATCTGCAACTTCTGTAGCATGCGCCCCTGGATACACTGTTTATCCACCTATCCAAAGGCCTGCTGCTGAATCTGCTAATACTGAACTTGATGTTGAACATACTTCAAGTGAACAAAAACAACGACAGTTTGTCATCCCTGGTGGACCAATGAATGTTTCCTTTCATCCAATGGGACCGTTTCCATTTCCTCCTCCTCCTCTAACACATGTAGCAAATGGGAATTTTGGAGAGGGATCTGGGTCTGATCCAAATGCGCCAAACTCTGTTCTGGAAGTTCAAAGAATTCGGCACCAGATTGAGATGTTACAACAGCAACTCCAGATTCTACAGAAGGCAAGTGTTGAGGAAAATGTAAATGAGGGCAAGTCATCATCAAGTAGCAAAGGCAAGCAGGTTGAGGAAATTTAA 1773 0.4219 MIMIDYTPETHRKRATKGALIIDICLTIVRCGFFRRNKIPISSSFYRFFNFHGKMMRLQTYAGLSFIATLAVTYHAFNSRGQFYPAMVFLSTSKISLVLLLNMGLVIMCLLWQLTKRVFLGTLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMGFLLLLDGLFLYSSMKHLIQSWQASVSLFFAFEYMILATTTVSIFVKYLFYVSDMLMEGQWEKKPVFTFYLELVRDLLHLSMYMCFFLVIFINYGVPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELDVSDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGATTAGGQHGSQSDRQGAGTGAGSSAQAEAGSGAATDNLSRHQARLRAAAAAASMYEKSYVYPSATSVACAPGYTVYPPIQRPAAESANTELDVEHTSSEQKQRQFVIPGGPMNVSFHPMGPFPFPPPPLTHVANGNFGEGSGSDPNAPNSVLEVQRIRHQIEMLQQQLQILQKASVEENVNEGKSSSSSKGKQVEEI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1330 590 MobiDBLite consensus disorder prediction 394 431 - -
Mibi07g1330 590 SUPERFAMILY RING/U-box 326 390 - -
Mibi07g1330 590 MobiDBLite consensus disorder prediction 396 431 - -
Mibi07g1330 590 PANTHER RING ZINC FINGER PROTEIN 53 574 - -
Mibi07g1330 590 MobiDBLite consensus disorder prediction 570 590 - -
Mibi07g1330 590 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 318 391 IPR013083 -
Mibi07g1330 590 CDD RING-H2_synoviolin 343 384 - -
Mibi07g1330 590 ProSiteProfiles Zinc finger RING-type profile. 346 384 IPR001841 -
Mibi07g1330 590 Coils Coil 547 574 - -
Mibi07g1330 590 Pfam Ring finger domain 345 384 IPR001841 -
Mibi07g1330 590 FunFam ERAD-associated E3 ubiquitin-protein ligase HRD1A 318 393 - -
Mibi07g1330 590 SMART ring_2 346 383 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1330 Mibi-ChrMibi07 21657974 21664822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1330 55 485 C3H Transcription Factor Family AT3G16090 74.537 0.0 661