Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1295 ATGGACGGAGTTGTTCATGGCGGTACGGCGGCGGCAACTATGAATTCTCCGCCTCCATTCCTGAGCAAGACGTATGACATGGTGGACGACACTTCCACAAACTCGGTGGTCTCATGGAGTGATAATAGCAACAGCTTTGTTGTTTGGGATGTTCCTGAATTCGCTAGGGCCATCTTGCCCAAGTACTTTAAGCACAACAATTTCTCCAGCTTCGTCAGGCAATTGAATACTTACGGTTTTAGAAAGGTTGATCCAGACCGCTGGGAATTCGCAAATGAAGGATTTTTAAGGGGTCAGAAACAACTTTTGAAGAGTATCAGCAGGAGGAAAACTACTCAAGTGAATGGTAATCAACAGCCATCTCCAGCGCAGAACAAACCTGTTGGGGCATGTATTGAGGTTGGAAAGTTTGGGCTTGAGGAAGAGGTTGAAAGATTGAAAAGGGATAAGAATGTTCTTATGCAAGAACTTGTTAGGTTGAGACAACAGCAACAATCTACCGATACCCAAATGCAAAGTGTTGGGCAACGTGTGCAGGTTATGGAGCAGCGCCAGCAACAGATGATGTCATTTCTGGCAAAGGCCATGCAAAGCCCAGGATTTATGGCACAGTTTGTACAGCAACAGAGTGACAGTAACAGACATATTGCTGGGGGAAATAAAAAGAGGAGACTTCAAAAGCAGGAAGAGGATACATTACCTTCTGATCATCTCTATAATGCTCTTGACGGACGAGTTATGAAATGTCAACCTTCTATGAATGAGGCTGCAAAAGCATTATTGCGCCAGATATTGCAAATGAATGCTTCTTCAGGGAGGGAATCGTCAATAAATAACCCTGATGCCTTTCTTATTGATGATATTCCTTCTGCCATTCCGTTAGATAGTGGTAGTTCCTCTAGTCGGGCTTCAGGAGTGACTCTTTCTGAGGTTCCACCTACTTCTGGCCAGTCTTATATGGCAGGGCAATCACAGTTTCCTGTTAATTGTGTTCCCACCAACATATCTGAGATGCAATCTTCTAGTACTGTGTTGACTGATCCTGTTAAAGTTGCTGACTTTCCAGGATTAAATTTGCATAATTGCCCAGAGAATGTTTTGAGTATTGGTGAAGTCCAAGGTGTGGAGGTAGGGAGCAGTTTAGTGAATCCTGAACTCACTTTTGCAGGGCCTGACACTGGGAATGCAGGGGACATAGACATGATGTCAGCAGTTTTGGATGGCGCACAATCTGTGGAGTTGGAAGCTGATGCATTTTCACCTGATCCAGATGGAATTTCTAAGCTCCCAAGCATTAATGATGTTTTCTGGGAACAGTTTCTCACGGCAAGTCCACTCACAGGGGATACCGATGAAATTAGTTCTTCCCCTCTTGGAGATGGTTTGGCCAAGGAAGGGGAATCTCCTTCTAGAAAGGAGAATGGACAGGAAAAGTTGGATAAGATAAAGCGTATTGATCATCTTGCTCGACAGATGGAACTTCTTGCTTCCAACACTTCCTAA 1503 0.4431 MDGVVHGGTAAATMNSPPPFLSKTYDMVDDTSTNSVVSWSDNSNSFVVWDVPEFARAILPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQLLKSISRRKTTQVNGNQQPSPAQNKPVGACIEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDTQMQSVGQRVQVMEQRQQQMMSFLAKAMQSPGFMAQFVQQQSDSNRHIAGGNKKRRLQKQEEDTLPSDHLYNALDGRVMKCQPSMNEAAKALLRQILQMNASSGRESSINNPDAFLIDDIPSAIPLDSGSSSSRASGVTLSEVPPTSGQSYMAGQSQFPVNCVPTNISEMQSSSTVLTDPVKVADFPGLNLHNCPENVLSIGEVQGVEVGSSLVNPELTFAGPDTGNAGDIDMMSAVLDGAQSVELEADAFSPDPDGISKLPSINDVFWEQFLTASPLTGDTDEISSSPLGDGLAKEGESPSRKENGQEKLDKIKRIDHLARQMELLASNTS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1295 500 MobiDBLite consensus disorder prediction 446 483 - -
Mibi07g1295 500 Coils Coil 136 163 - -
Mibi07g1295 500 PRINTS Heat shock factor (HSF) domain signature 58 70 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi07g1295 500 PRINTS Heat shock factor (HSF) domain signature 20 43 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi07g1295 500 PRINTS Heat shock factor (HSF) domain signature 71 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi07g1295 500 SUPERFAMILY "Winged helix" DNA-binding domain 15 109 IPR036390 -
Mibi07g1295 500 SMART hsfneu3 16 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi07g1295 500 ProSitePatterns HSF-type DNA-binding domain signature. 59 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi07g1295 500 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 14 314 IPR027725 -
Mibi07g1295 500 Pfam HSF-type DNA-binding 20 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi07g1295 500 MobiDBLite consensus disorder prediction 465 483 - -
Mibi07g1295 500 FunFam Heat shock transcription factor 1 13 110 - -
Mibi07g1295 500 Gene3D - 12 111 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1295 Mibi-ChrMibi07 20618041 20622562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1295 14 497 HSF AT5G16820 52.929 4.04e-151 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi07g1295 HSF_DNA-bind 1.6e-32 CL0123