Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1289 ATGGGAAGAAAAAATGGCGGAAGGTCACTGCACGAAATCCTTCGTCGTCGTCTTGAGACCTGCAAATCCAGGTACTCAACTGTTGGTGAAATTGTAAACCATCTTCGTGAAAGTTACCCAGATTACCAGCGAACAAAGCAACAAACTTTGACTCGATTTGTTCAAGAAGCTTTGGAGTCATCTAAGCGTGGGAACAAGCAGCTGAACAGAAAGCCCAATACTCCCATATTGAAGCCTGACTCCTCAGATGATGATAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTCGAAGTGCATCTCGAAAAAGGCGCAAGAGGGTTGATGAAAGTGAAGAGAGATTGCAAAAATTGGAAAGTTTACATCTTCAAAGGTTACAAAGGGATCGGAGCCATTTATCATCTTCTTCTGCCTCAACTTCTAGTCCATCATTGTCATCAGAATCTGAAGAGAGTGATGGTGAAGATGGGACAGTGTCTACATCAGAGGATGCGATATATGAGGAGAAAGTGGAACCAGCATTTGACTTGATGAAAACAATGTTACGGGCTTCATACACAGAAACAAAGAATGTGAAATCTACAGAAGAGGAGAAAAACGTTGAACTGGAGGTGACTAATGATAAGAAGGCAACTAAGATCGATGCTATGAATGGGGTTGGAGGTAACATGAAAGATGATTTGGAACCAAAAAGGCAATTGAGGGGTTCAGTTTCGAATGGCAATGGTGATGTTGAGGTCAAGGGGAAGGGTGGACCTAGATTCAAAGATCTGGGTGGAATGGAGAAGGTGCTGGAGGAATTGAAGATGGAAGTAATTGTACCTCTTTATCATCCACAGTTGCCAAGAAAGTTAGGAGTGAGGCCAATGGCAGGGATTTTGTTACATGGACCCCCAGGGTGTGGTAAAACCACTCTGGCTCTTGCTATAGCTAATGAGACTGGTTTTCCGTTCTATCAGATATCAGCTACAGAAGTGGTTTCTGGAGTTTCAGGAGCGTCTGAAGAAAACATTAGAGAGCTTTTTTCTAAAGCATACAAGACTGCCCCGTCCATTGTCTTTATTGATGAGATTGATGCAATTGCTTCAAAAAGAGAGAATTTACAACGTGAGATGGAGAAACGAATTGTGACACAATTAATGACTTCCATGGATCAATCAAGCAGGCTCTTACAACCAGCTGATGGTTCAGAAAGTTCTGATGCTCATCCTGGCTATATTCTTGTTATTGGAGCTACAAATAGGCCCGATGCTGTTGACCCTGCCCTGAGAAGGCCTGGGCGATTTGATCGTGAAATTTTCCTCGGTGTTCCTGATGAATATGCCAGGGAGGAGATCTTGTCTGTGCTTACTCGCAATCTAACTCTGGATGGCTCATTTGATCTTAGAAAAATAGCCAGGTCCACACCAGGTTTTGTTGGAGCAGATTTGGCAGCTCTAGCTGACAAGGCAGGTAACCTAGCAATGAAAAGAATAATTCATGAAAGGAAGCGTGAATTATCCCAAGATCTTTTAAACGAGCGTGATGATGATTGGTGGAGGGAACCTTGGTTACCAGAAGAGATGGATAAGCTTGTCATCAAAATGTCAGATTTCGAGGAAGCAGTCAAATTGGTGCAACCTTCATCAAGAAGAGAAGGGTTTTCTTCCATTCCGAATTTAAAATGGGAAGATATTGGTGGGCTTGGTTTCCTAAGACAAGAGTTTGAGCGTTATATTGTTAGACGCATAAAATATCCAGATGATTATAAGGAATTTGGGGTAGATCTTGAGACAGGATTTTTGCTTTATGGACCACCAGGGTGTGGCAAGACACTGATAGCCAAAGCTGTTGCCAACGAGGCAGGAGCTAATTTTATTCATATCAAGGGCCCTGAACTTCTAAATAAATACGTTGGAGAAAGTGAGCTTGCTGTACGGACATTGTTTAGTCGTGCAAGAACATGTTCACCTTGCATTCTTTTCTTTGATGAGGTGGATGCACTGACAACCAAACGTGGTAAAGAAGGTGGATGGGTTGTTGAGCGACTATTGAACCAGTTACTTATTGAATTAGATGGGGCAGAGCAAAGGCAAGGTGTTTTTGTAATTGGTGCCACAAACAGACCTGAGGTGATGGACCGTGCGGTCCTTCGGCCTGGTAGGTTAGGTAAACTTCTGTATGTTCCTCTGCCAAACCCAGATGAGCGAGGTTTGATCTTAAAAGCCCTTGCAAGGAAGAAACCAATTGATGACAGTGTGGATTTGTTAACCATTGGAAGAATGGAAGCTTGTGAAAATCTCAGCGGTGCTGACCTTGCTGCATTGATGAATGAAGCAGCTCTGGTTGCTGCTGAAGAGAAGTCAGCATCTACAGAGACAACTTCAGATGCATTGACCATCAAGTTCAGCCATTTTGAGACTGCTCTCTCTAAAATCTCTCCCTCGGTGTCAGACACGCAAAAACTGTATTATCAACGATTGGCAGAGACTTTTAAAGCTGCATGA 2484 0.4295 MGRKNGGRSLHEILRRRLETCKSRYSTVGEIVNHLRESYPDYQRTKQQTLTRFVQEALESSKRGNKQLNRKPNTPILKPDSSDDDNEEEEEEEEEGRSASRKRRKRVDESEERLQKLESLHLQRLQRDRSHLSSSSASTSSPSLSSESEESDGEDGTVSTSEDAIYEEKVEPAFDLMKTMLRASYTETKNVKSTEEEKNVELEVTNDKKATKIDAMNGVGGNMKDDLEPKRQLRGSVSNGNGDVEVKGKGGPRFKDLGGMEKVLEELKMEVIVPLYHPQLPRKLGVRPMAGILLHGPPGCGKTTLALAIANETGFPFYQISATEVVSGVSGASEENIRELFSKAYKTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTSMDQSSRLLQPADGSESSDAHPGYILVIGATNRPDAVDPALRRPGRFDREIFLGVPDEYAREEILSVLTRNLTLDGSFDLRKIARSTPGFVGADLAALADKAGNLAMKRIIHERKRELSQDLLNERDDDWWREPWLPEEMDKLVIKMSDFEEAVKLVQPSSRREGFSSIPNLKWEDIGGLGFLRQEFERYIVRRIKYPDDYKEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGAEQRQGVFVIGATNRPEVMDRAVLRPGRLGKLLYVPLPNPDERGLILKALARKKPIDDSVDLLTIGRMEACENLSGADLAALMNEAALVAAEEKSASTETTSDALTIKFSHFETALSKISPSVSDTQKLYYQRLAETFKAA 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1289 827 FunFam ATPase, AAA family protein 551 729 - -
Mibi07g1289 827 Gene3D - 724 803 - -
Mibi07g1289 827 Pfam AAA+ lid domain 459 494 IPR041569 -
Mibi07g1289 827 Pfam AAA+ lid domain 745 787 IPR041569 -
Mibi07g1289 827 Gene3D - 551 814 IPR027417 -
Mibi07g1289 827 Gene3D - 437 545 - -
Mibi07g1289 827 PANTHER AAA-FAMILY ATPASE 85 825 - -
Mibi07g1289 827 MobiDBLite consensus disorder prediction 95 128 - -
Mibi07g1289 827 ProSitePatterns AAA-protein family signature. 406 424 IPR003960 GO:0005524|GO:0016887
Mibi07g1289 827 CDD AAA 287 435 - -
Mibi07g1289 827 SMART AAA_5 589 725 IPR003593 -
Mibi07g1289 827 SMART AAA_5 288 438 IPR003593 -
Mibi07g1289 827 Coils Coil 100 120 - -
Mibi07g1289 827 Gene3D - 246 435 IPR027417 -
Mibi07g1289 827 FunFam Cell division control protein 48 homolog C 437 545 - -
Mibi07g1289 827 MobiDBLite consensus disorder prediction 58 76 - -
Mibi07g1289 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 253 544 IPR027417 -
Mibi07g1289 827 ProSitePatterns AAA-protein family signature. 693 711 IPR003960 GO:0005524|GO:0016887
Mibi07g1289 827 FunFam Ribosome biogenesis ATPase RIX7 243 435 - -
Mibi07g1289 827 CDD AAA 592 723 - -
Mibi07g1289 827 MobiDBLite consensus disorder prediction 58 170 - -
Mibi07g1289 827 Pfam ATPase family associated with various cellular activities (AAA) 292 435 IPR003959 GO:0005524|GO:0016887
Mibi07g1289 827 Pfam ATPase family associated with various cellular activities (AAA) 594 722 IPR003959 GO:0005524|GO:0016887
Mibi07g1289 827 MobiDBLite consensus disorder prediction 129 147 - -
Mibi07g1289 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 551 824 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1289 Mibi-ChrMibi07 20553510 20559478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1289 524 825 Calmodulin-binding Proteins AT3G56690 43.092 1.81e-68 243