Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1224 ATGGGAAGCAGCTCCCAAGTTATAACATGCAAAGGGACAATATGTTGGGGAATAGGAGAAGCAGTGAAAGTGGAAGAGATACAAGTAGATCCTCCTAAAGCTTATGAGGTTCGCGTGAAGATGCTTTTTGCCAGTATCTGCCACACAGATTTTGTGAGGGCTCGTGGTCATCCATATCCCTGTTTTCCTCTAGCACTAGGGCATGAAGGTGTAGGTGTTGTGGAGAGCGTAGGGGGGAAAGTGACAGATTTCAAAGAAGGAGATTTAGTGATTCCAATAGGCGTTGGAGAATGTGGAGAGTGTGAGAATTGTGTTTCAAAGGAATCAAATATTTGCCTGAGATATCCTTTAATTGTGAGTGGATTAATGCCTGATGGCACATCAAGGATCTCTGTTGGTGGCCAAAAAGCATACCACATGTTTAGCTGCTCAACATGGTGTGAGTATATGGTTAGTGATGAGAACTACCTTTTGAAAGTTGACCCAAGTATTGATTTGGCTCATGCTAGCTTCATATCTTGTGGTTTCTCTACTGGTTTTGGAGCTTCTTGGAAAACAGCCCAAGTTCAAGGTGGTTCATCTGTGGCTGTTTTTGGCCTTGGAGCTGTTGGATTAGGGGCAATAAGTGGAGCCAAGATGATGGGAGCAACAAGGATAATTGGGATTGACATAAATGCGAGGAAGAGAGAAAAAGGGGAAGCTTTTGGAATGACAGATTTCATAAATCCTAAGGACCATTATGATAAGCCTTCTTCTCAATTGGTGAAGGATCACACCAATGGATTAGGTGTGGACTATGCCCTTGAGTGCACTGGTGTTGCCACTTTGCTCACTCAAGCCCTAGAATCTACCAAACTGGGCAAAGGAAAGGCAATAGCAATTGGGGCAGGAATTGAAGAATTTGTGCCAGTCAACTGGATGGGTCTTCTTCTTGGAAGAACTTTGAAGGGTTCAATTTTTGGAGGCTTGAAACCCAAATCTGACCTTTCTATTTTAGCCGCTAAATGCCAAAAGAAGGATTTCCCTCTTGATGAGCTTTTCACCCATGAAGTCCCGTTGACAGAGATAAACAAAGCTTTTGAGCTCTTGAAACAGCCAGATTGTGTCAAAGTTATTATCAAAATGTGA 1128 0.4291 MGSSSQVITCKGTICWGIGEAVKVEEIQVDPPKAYEVRVKMLFASICHTDFVRARGHPYPCFPLALGHEGVGVVESVGGKVTDFKEGDLVIPIGVGECGECENCVSKESNICLRYPLIVSGLMPDGTSRISVGGQKAYHMFSCSTWCEYMVSDENYLLKVDPSIDLAHASFISCGFSTGFGASWKTAQVQGGSSVAVFGLGAVGLGAISGAKMMGATRIIGIDINARKREKGEAFGMTDFINPKDHYDKPSSQLVKDHTNGLGVDYALECTGVATLLTQALESTKLGKGKAIAIGAGIEEFVPVNWMGLLLGRTLKGSIFGGLKPKSDLSILAAKCQKKDFPLDELFTHEVPLTEINKAFELLKQPDCVKVIIKM 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1224 375 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
Mibi07g1224 375 SUPERFAMILY GroES-like 4 187 IPR011032 -
Mibi07g1224 375 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Mibi07g1224 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 318 - -
Mibi07g1224 375 Gene3D - 14 370 - -
Mibi07g1224 375 SUPERFAMILY GroES-like 327 373 IPR011032 -
Mibi07g1224 375 Pfam Alcohol dehydrogenase GroES-like domain 36 160 IPR013154 -
Mibi07g1224 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Mibi07g1224 375 Gene3D - 179 318 - -
Mibi07g1224 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 337 IPR036291 -
Mibi07g1224 375 Pfam Zinc-binding dehydrogenase 202 322 IPR013149 -
Mibi07g1224 375 SMART PKS_ER_names_mod 17 373 IPR020843 GO:0016491
Mibi07g1224 375 CDD liver_alcohol_DH_like 8 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1224 Mibi-ChrMibi07 18750811 18754104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1224 36 367 Monolignol Biosynthesis Gene Families AT4G37990 28.235 1.21e-16 78.6