Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1223 ATGGCAAGCAGCTCACAAGTTATAACATGCAAAGGAGCAATATGTTGGGGAATAGGACAGGGAATGAAATTGGAAGAGATACAAGTAGACCCTCCTAAAGCTTCTGAAGTCCGAGTTAAGATGCTTTATGCAAGTTTGTGCCACACAGATATCTCAAGAATTCAAGGATGGCAACATCCTGTTTTTCCTCAAGCACTGGGGCATGAAGGTGTAGGGCTTGTGGAGAGCATAGGTGAGAAAGTGACAGATTTCAAAGTAGGAGATCTGGTTATTCCAGTATTTATTGGAGAGTGTGGAGAATGTGAGAACTGTGTTTCAAAGGAATCAAACTTTTGCCTGAGATATCCTGTGAGAGTGAATGGGTTAATGCCTGATGGCACATCAAGAATTTCTGTTAGAGGGCAAAAGGCACACCATTTGTTTAGTTGCTCAACTTGGTGTGAGTATATGGTCAGTGATGAGAATTACCTTTTCAAAGTTGATCCAACTATTGATTTGGCTTATGCTAGCTTCATCTCTTGTGGATTCTCTACTGGTTTTGGGGCTGCTTGGAAGACAGCCCAAGTTCAAAGTGGATCATCTGTAGCTGTTTTCGGCCTTGGAGCTGTTGGATTAGGGGCTATAAGTGGAGCCAAGATGATGGGAGCAACAAAGATAATTGGGATTGACATAAATGAAAAGAAGAGAGAAAAAGGAGAAGCTTTTGGAATGACAGACTTCATAAATCCTAAGGATTATTCTGATAAGCCTTATTCTCAATTGGTGAAGGATCTCACCAATGGATTGGGTGTTGATTATGCCCTTGAGTGCACTGGTGTTGCCCCTTTACTTGCCCAAGCCTTAGAATCCACAAAACCGGGGAGAGGAAAGGCAATAACAGTCGGTATAGGAATAGAGGAATTTGTGCAGGTCAACTGGCTAGGTCTTCTTCTTGAAAGAACTTTAAAGGGTTCCACTTTTGGAAGCATAAAACCCAAATCTGATCTCCCATTTATAGCTACCAAATGCCAACACAAGGATCTCCCTCTTGATGAGCTTCAGACCCATGAAATCCCATTGACAGAGATAAGCAAAGCATTTGAGCTATCAAAACTGCCAGAATGTGTGAAAGTTGTCATCAAGATATAA 1128 0.4176 MASSSQVITCKGAICWGIGQGMKLEEIQVDPPKASEVRVKMLYASLCHTDISRIQGWQHPVFPQALGHEGVGLVESIGEKVTDFKVGDLVIPVFIGECGECENCVSKESNFCLRYPVRVNGLMPDGTSRISVRGQKAHHLFSCSTWCEYMVSDENYLFKVDPTIDLAYASFISCGFSTGFGAAWKTAQVQSGSSVAVFGLGAVGLGAISGAKMMGATKIIGIDINEKKREKGEAFGMTDFINPKDYSDKPYSQLVKDLTNGLGVDYALECTGVAPLLAQALESTKPGRGKAITVGIGIEEFVQVNWLGLLLERTLKGSTFGSIKPKSDLPFIATKCQHKDLPLDELQTHEIPLTEISKAFELSKLPECVKVVIKI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1223 375 Gene3D - 179 318 - -
Mibi07g1223 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 318 - -
Mibi07g1223 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 334 IPR036291 -
Mibi07g1223 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Mibi07g1223 375 PANTHER ALCOHOL DEHYDROGENASE 6 364 - -
Mibi07g1223 375 SMART PKS_ER_names_mod 19 373 IPR020843 GO:0016491
Mibi07g1223 375 SUPERFAMILY GroES-like 4 189 IPR011032 -
Mibi07g1223 375 Gene3D - 14 370 - -
Mibi07g1223 375 CDD liver_alcohol_DH_like 8 374 - -
Mibi07g1223 375 Pfam Zinc-binding dehydrogenase 202 322 IPR013149 -
Mibi07g1223 375 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Mibi07g1223 375 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1223 Mibi-ChrMibi07 18724220 18726742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1223 36 174 Monolignol Biosynthesis Gene Families AT4G37970 33.333 1.16e-18 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g1223 07 18724220 18726742 Mibi07g1223 07 18724220 18726742 ECH