Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1172 ATGTTATTGGGTATTGGGTATAAGTCTTCTTCTTCCCACTTTTCATTACCGGTTTACTTCTCAAGTGTTAAATCCGGTTTCTTCACTGAGTACGGGGATGCCAATCGATACCAGCTTCTTGAAGTTATAGGGAAGGGTAGTTATGGAGTTGTTTGTGCGGCAATTGATACACACACTGGAGAAAAAGTAGCAATAAAGAAGATCCATGATGTTTTTGAACATGCATCTGATGCTATTAGAATTCTTCGTGAAGTCAAATTACTCAGGCTTTTAAGGCACCCTGATATTGTCCAAATTAAGCGGATAATGTTGCCACCTTCAAAGAGAGATTTTAAAGATATTTATGTAGTCTTTGAGCTGATGGAATCTGATCTCCATCAAGTTATTAAAGCTAATGATGATTTGACCCGGGAACATCACCAGTTTTTCCTATATCAGCTTCTTCGGGCATTGAAATATATGCATACAGCAAATGTATATCACAGAGACCTCAAACCCAAGAACATATTGGCAAATGCAAATTGCAAGCTCAAAATTTGTGACTTTGGACTGGCAAGAGTTGCATTCAATGATGCTCCAACAACAATATTCTGGACAGATTATGTTGCTACTAGATGGTACAGAGCCCCAGAACTCTGTGGAGCATTCTCTTCTAAGTATACACCAGCTATTGATATATGGAGCATTGGCTGCATCTTTGCTGAGGTCTTAACTGGAAAGCCATTGTTTCCTGGTAAAAGTGTTGTACATCAAATAGATTTGATGACTGATCTTCTTGGGACCCCATCACCAGAAACTATTTTAGGAGTTCGAAATGAAAAGGCAAGAAAATATTTGATGGAAATGAGGAAAAAACGGCCCGTGCCTTTTGAGCAGAAATTTCCAAATGCTGATCCATTGGCACTTCGCCTTTTGCAAAGGCTTCTAGCATTTGATCCCAAAGATCGACCAACTGCTGAAGAGGCACTGGCTGATCCTTATTTCAAGGGCTTGTCCAGAGTTGAGAGAGAACCTTCTCGTCAGTCAATTTCAAAGTTGGAATTTGAGTTTGAGAGGCGAAGGTTGACGAAGGAGGATATTAGAGAACTAATATATCGTGAAATACTAGAATATCACCCTCAGATGCTCAAAGATTACTTGAATGGAACTGAAGGCAACTTCCTCTATCCCAGTGCAATAGGCCAGTTCAGAAAGCAATTTGCTTATCTTGAGGAAAATGGTGACTCAGTCACTCCTCCAGAAAGGAGACATGTCTCCCTTCCAAGGCCCACTACTGTTCACTCGGGTACAATCCCTCTTAATACAATGCCAACTTTCAATGTGTATGAGAACAAGCAAAATGCAGGAGAGGCATATAAGAGTTTTAGAGCAGCAGAATCGAATTCTGGAAGTCAAATGAGGGGATCCCAGCATCCACCAAGGGTGCCGAAAGCTAAGCCAGGGGGAGTCGTAGGCCCAGTTATACCCTATGAAAATGACAGAAGCACGACTACTTTTTATGGCCCAATGATCTTTTATCAAAATGCTCTTCCCCAAGCGGCTAGTTCTCCTCACTGCTGTTATAGACTTCAACCCATTAACTCACAGAAGATTGTATCAGAGACATACCAGGTTGTTTCACAATGCAAACAGCATCAAGTCCCACTCCAGCAATGTCAACACCTAACCAGACCTGCGATTGACCTAAACACCAATCCGTACCACCAAGAAGCCAAGTCCGACCAGTTCGACAATCCCATGATTACAGTTGATACAAGGCTGTTGCAGGCACAGTCTCACTATGGTGCAGTTGGTGTTGCAGCAGTAGCCATTGCAGCTCATAGACATTCTGGTGCTGTGCAGTATGGATTGTCATAA 1857 0.42 MLLGIGYKSSSSHFSLPVYFSSVKSGFFTEYGDANRYQLLEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHASDAIRILREVKLLRLLRHPDIVQIKRIMLPPSKRDFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQLLRALKYMHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDAPTTIFWTDYVATRWYRAPELCGAFSSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQIDLMTDLLGTPSPETILGVRNEKARKYLMEMRKKRPVPFEQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFKGLSRVEREPSRQSISKLEFEFERRRLTKEDIRELIYREILEYHPQMLKDYLNGTEGNFLYPSAIGQFRKQFAYLEENGDSVTPPERRHVSLPRPTTVHSGTIPLNTMPTFNVYENKQNAGEAYKSFRAAESNSGSQMRGSQHPPRVPKAKPGGVVGPVIPYENDRSTTTFYGPMIFYQNALPQAASSPHCCYRLQPINSQKIVSETYQVVSQCKQHQVPLQQCQHLTRPAIDLNTNPYHQEAKSDQFDNPMITVDTRLLQAQSHYGAVGVAAVAIAAHRHSGAVQYGLS 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1172 618 Gene3D Transferase(Phosphotransferase) domain 1 123 351 - -
Mibi07g1172 618 ProSiteProfiles Protein kinase domain profile. 37 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1172 618 Gene3D Phosphorylase Kinase; domain 1 52 374 - -
Mibi07g1172 618 SMART serkin_6 37 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1172 618 FunFam Mitogen-activated protein kinase 27 131 - -
Mibi07g1172 618 FunFam Mitogen-activated protein kinase 123 351 - -
Mibi07g1172 618 ProSitePatterns Protein kinases ATP-binding region signature. 43 67 IPR017441 GO:0005524
Mibi07g1172 618 ProSitePatterns MAP kinase signature. 72 175 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mibi07g1172 618 MobiDBLite consensus disorder prediction 457 483 - -
Mibi07g1172 618 MobiDBLite consensus disorder prediction 407 432 - -
Mibi07g1172 618 Pfam Protein kinase domain 37 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1172 618 SUPERFAMILY Protein kinase-like (PK-like) 33 332 IPR011009 -
Mibi07g1172 618 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 36 375 - -
Mibi07g1172 618 CDD STKc_TDY_MAPK 36 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1172 Mibi-ChrMibi07 17360559 17365250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1172 27 616 MAP Kinase Gene Family AT1G53510 66.941 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mibi07g1172 Pkinase 3.2e-67 CL0016