Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1139 ATGATTCACTCACATTCATATCTTTCATCGCAAGCACAAGAAACTCGTGACCACACTCTTCACTCCCGTTTTGACTGGTACTCTTCTTCTTCTTCTTATCTGCTTTCTTCCTTTGGGAGGAAGTTGCTTAATTATTTGATGGGCCACTTTTACAGTGATCATGTCCCCGGAGATATGTATAACAGTATTGGTATTTCTCATCACATACCCGGTTGCGTTGGACGGCTTTTGAGAGAAAGAGAACAAAGTAGAAAGGACTATTCACTTAGACAACGCCTTTTGGTGGTGGCCAACAGGCTGCCAGTCTCAGCAGTTAGGACAAGCGAAGACTCGTGGTCCATGGAGATGAGTGCTGGTGGTCTTGTGAGTGCTCTTTTAGGTGTTAAAGAGATTGAGGCAATTTGGATTGGTTGGGCTGGTGTCAATGTGCCGGATGAGATTGGACAGAAGACACTTACCAAAGCTTTGGCTGAAAAGAGGTGCATTCCAGTAATTCTTGATGAAGAGATTGTTCATCAATATTATAATGGTTACTGCAATAACATCTTGTGGCCCGTTTTTCATTACCTTGGGCTTCCACAAGAAGATCGACTTGCCACCACAAGGAATTTTCAATCTCAGTTTGCAGCATATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAAAGAACACTATCGGGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTCATGTTTCTTCCAAAATTCTTAAAGGAGTATGACAGCAAAATTAAAGTTGGCTGGTTTCTCCACACTCCATTTCCATCTTCAGAAATTCATAGGATGCTGCCATCTCGATCAGAGCTCCTGCGTTCTGTTATTGCGGCTGATTTAGTTGCTTTTCACACCTATGATTATGCAAGGCACTTTGTTAGCGCTTGCACTCGCATTCTTGGGCTGGAGGGTACACCTAAAGGGGTTGAAGATCAAGGGAGATTGACTCGAGTTACTGCATTTCCAATTGGGATAGACTCGGACAGATTCATACGTGCACTTGATCTTCCTCAAGTTAAGGATAGCATCAAAGAATTCGAACAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGTCTTGATATGATTAAGGGAATTCCTCAGAAAATTTTAGCATTTGAAAAATTTCTGGAAGAGAATGCCTACTGGCGTGATAAAGTAGTCTTGATTCAAATTGCTGTGCCAACAAGAACAGATGTTCTTGAATATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATTAATGGAAGATTTGGAACACTGACTGCTGTTCCTGTACTTCACCTGGATCGCTCTCTCGAGTTTCATAAACTATGTGCTTTGTATGCTGTAACAGATGTAGCGCTTGTCACGTCTTTGAGGGATGGGATGAATCTTGTAAGCTACGAATATGTGGCCTGTCAAAAGAGAAAGAAGGGAGTACTCATTCTTAGTGAATTTGCTGGTGCTGCACAGTCTCTAGGTGCTGGTGCAATTCTGGTTAACCCTTGGAACATCACTGAAGTTGCTTCTGCTATAGGCCAGGCTCTGAAAATGCCATCTGAGGAAAGAGAGAAGAGGCACGCACGCAACTTTTTACATGTAGAAACCCACACCGCTCAGCAATGGGCAGAAACTCTTGTAAGGGAACTAAACCTAACTGTTTATGAGCAACGACAAAGGATGAGACAAGTTCCAGCCACACTTCCAACCCAGGATGTGGTGGAACGTTATCTCCAGTCAACTAACCGATTGATTATTTTGGGATTCAATGGATGTTTAACTGAACCCGTGGAGAAAAGAGGTGGCCAGATTAAAGAAATGGAACTAAAGGTGCATCCAGAATTAAAACAGCCTTTGTCAGAATTATGCAACGACCCAAATACGACAATTGTTATTCTTAGTGGAAGTGATACAGAAGTCTTAGAGGAGAATTTTGGGGAGTATGACCTGTGGTTGGCCGCAGAGAATGGGATGTTTATACACCCTGCAAAAGGAAAATGGATGTCAACAATGCCTGAGCTTCTGAATATGGAATGGGTTAACAGTGTGGAGCATGTTTTTGAGTACTTCACCGAAAGAACACCCCGGTCACATATTGAAAAACGGCAGACATCAATTGTGTGGAATTACAAGTATGCAGATATTGAATTTGGAAGACTTCAAGCAAGGGACTTGCTGCAGCATCTCTGGACACTGACAGGTCCAATCTCTAATGCACCAGTTGATGTGATTCATGATAGCCGATCTGTTGAAGTGCGTGCTGTCGGTATAACAAAGGGAGCAGCTATGGACCGCATCCTAGGTCACATAGTACACTGTAAATCCATGACATCACCAGTTGATTATGTCTTGTGTGTAGGACATTTTCTGGTAAAGGATGAAGATGTTTTTACCTTTTTTGAGCCAGAACCTCGAGCAAGGGAGATAGATAGAGATGAGCTTTTTGCTGACAAGAGATTGCCTTTGAAGGCTCCAGCCAGTAAAAGTGGACCAAAGGCATCCAAAAATAATAATGCACAAAGGCCAAAGTCAAATTCTGAGAGCTGTAGTGCACCTTGGATTCCAACTCGTGGAACTGAAACAATTTCATGGGATATCCTAAATCTTAAGAAGGAGAATTACTTCTCTTGTGCTGTTGGACCGACTCAATCGAGTGCTCGGTATATGCTTGGATCATCATCAAATGACGTTGTTGCTTTTCTGAAGAAACTGGCTGCTGCTGCATCTTTGAACTCCTCATCAAGTTAA 2766 0.4237 MIHSHSYLSSQAQETRDHTLHSRFDWYSSSSSYLLSSFGRKLLNYLMGHFYSDHVPGDMYNSIGISHHIPGCVGRLLREREQSRKDYSLRQRLLVVANRLPVSAVRTSEDSWSMEMSAGGLVSALLGVKEIEAIWIGWAGVNVPDEIGQKTLTKALAEKRCIPVILDEEIVHQYYNGYCNNILWPVFHYLGLPQEDRLATTRNFQSQFAAYKKANQMFADVVKEHYREGDVVWCHDYHLMFLPKFLKEYDSKIKVGWFLHTPFPSSEIHRMLPSRSELLRSVIAADLVAFHTYDYARHFVSACTRILGLEGTPKGVEDQGRLTRVTAFPIGIDSDRFIRALDLPQVKDSIKEFEQRFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLIQIAVPTRTDVLEYQKLTSQVHEIVGRINGRFGTLTAVPVLHLDRSLEFHKLCALYAVTDVALVTSLRDGMNLVSYEYVACQKRKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASAIGQALKMPSEEREKRHARNFLHVETHTAQQWAETLVRELNLTVYEQRQRMRQVPATLPTQDVVERYLQSTNRLIILGFNGCLTEPVEKRGGQIKEMELKVHPELKQPLSELCNDPNTTIVILSGSDTEVLEENFGEYDLWLAAENGMFIHPAKGKWMSTMPELLNMEWVNSVEHVFEYFTERTPRSHIEKRQTSIVWNYKYADIEFGRLQARDLLQHLWTLTGPISNAPVDVIHDSRSVEVRAVGITKGAAMDRILGHIVHCKSMTSPVDYVLCVGHFLVKDEDVFTFFEPEPRAREIDRDELFADKRLPLKAPASKSGPKASKNNNAQRPKSNSESCSAPWIPTRGTETISWDILNLKKENYFSCAVGPTQSSARYMLGSSSNDVVAFLKKLAAAASLNSSSS 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1139 921 Pfam Trehalose-phosphatase 612 812 IPR003337 GO:0003824|GO:0005992
Mibi07g1139 921 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 679 761 - -
Mibi07g1139 921 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 84 912 IPR001830 GO:0003824|GO:0005992
Mibi07g1139 921 SUPERFAMILY HAD-like 589 911 IPR036412 -
Mibi07g1139 921 Gene3D Glycogen Phosphorylase B; 339 542 - -
Mibi07g1139 921 CDD GT20_TPS 92 557 IPR001830 GO:0003824|GO:0005992
Mibi07g1139 921 Gene3D Glycogen Phosphorylase B; 83 338 - -
Mibi07g1139 921 MobiDBLite consensus disorder prediction 829 858 - -
Mibi07g1139 921 MobiDBLite consensus disorder prediction 836 858 - -
Mibi07g1139 921 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 92 557 IPR012766 GO:0003825|GO:0005992
Mibi07g1139 921 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 91 556 - -
Mibi07g1139 921 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 84 338 - -
Mibi07g1139 921 Pfam Glycosyltransferase family 20 92 557 IPR001830 GO:0003824|GO:0005992
Mibi07g1139 921 CDD HAD_TPP 590 809 - -
Mibi07g1139 921 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 339 542 - -
Mibi07g1139 921 Gene3D - 612 803 IPR023214 -
Mibi07g1139 921 Gene3D - 679 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1139 Mibi-ChrMibi07 16434564 16445037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1139 90 915 Trehalose Biosynthesis Gene Families AT1G78580 74.386 0.0 1301