Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1137 ATGAAGATTCAGTGTAACGTGTGTGAGGCGGCGGAGGCGGAGGTTCTGTGCTGTGCGGACGAGGCGGCGCTATGTCGGCAATGCGATGAGAAGGTTCACGCCGCTAATAAGCTCGCTACGAAGCATCAGAGGGTTCCTCTTTCTACTTCTTCCTCTCACATGCCTAAATGTGATATTTGTCAGGAAACAGTTGGCTATTTCTTCTGTCTGGAGGACCGAGCCTTGCTATGCAGAAAATGCGATGTGGCGATACACACAGCAAATCCCTATGTCTCTGCTCATCAGAGGTTTCTGCTTACTGGTGTAAGAGTGGGTCTTGAAGCTACTGAGCCTGTTCCACCATCGCCCTCTATGAAGTCAGATTCCGGGGGGAAAGTGTCAGATACAGTATCTACTTCTGTCTCCAGGAAGGTTTATTCAACGCCTCAGCCATCTCAATACAATGAATTGTCACCCACTCAGGTTGGAGGAATTGATGATTTTCAACCAACCAAGGTGTCTTATGGTGGTGGTTCTACAAACTGGCCGCTTGATGAATTTTTTGGTTTCAATGAATTCAGTCCGAACCTGAACTTTATGGATAATGCCAATGGACCATCCAAGGCTGAGAGCAGTAAGCTTGGAGATTCTGATTCTTCTGTTTTAAGATCTAGTGAAGAGGAAATGGACTATGAAGATCACTTGGGGTGTGTTCCGGATTCATCTTGGACAGTTCCTCAGATCCCTTCCCCTCCTACGGCTTCAGGCTTACATTGGCCAAAAGATCCTCGGTATTCTTCGGCTAACAATGCTATGTTTGTTCCAGACATATGCTCTCCTCACATCCAACAGCCTCTTCATGCTCAGAGAAATTGCACATTATCAAAGCGGAGAAGGCGACAGTAA 885 0.4689 MKIQCNVCEAAEAEVLCCADEAALCRQCDEKVHAANKLATKHQRVPLSTSSSHMPKCDICQETVGYFFCLEDRALLCRKCDVAIHTANPYVSAHQRFLLTGVRVGLEATEPVPPSPSMKSDSGGKVSDTVSTSVSRKVYSTPQPSQYNELSPTQVGGIDDFQPTKVSYGGGSTNWPLDEFFGFNEFSPNLNFMDNANGPSKAESSKLGDSDSSVLRSSEEEMDYEDHLGCVPDSSWTVPQIPSPPTASGLHWPKDPRYSSANNAMFVPDICSPHIQQPLHAQRNCTLSKRRRRQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1137 294 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Mibi07g1137 294 MobiDBLite consensus disorder prediction 194 255 - -
Mibi07g1137 294 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mibi07g1137 294 CDD Bbox1_BBX-like 5 47 - -
Mibi07g1137 294 MobiDBLite consensus disorder prediction 120 156 - -
Mibi07g1137 294 Pfam B-box zinc finger 54 94 IPR000315 GO:0008270
Mibi07g1137 294 Gene3D Classic Zinc Finger 1 93 - -
Mibi07g1137 294 MobiDBLite consensus disorder prediction 213 228 - -
Mibi07g1137 294 SMART bboxneu5 52 99 IPR000315 GO:0008270
Mibi07g1137 294 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mibi07g1137 294 MobiDBLite consensus disorder prediction 194 212 - -
Mibi07g1137 294 CDD Bbox1_BBX-like 56 99 - -
Mibi07g1137 294 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 273 - -
Mibi07g1137 294 FunFam B-box zinc finger protein 22 1 93 - -
Mibi07g1137 294 MobiDBLite consensus disorder prediction 110 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1137 Mibi-ChrMibi07 16411977 16414381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1137 1 293 C2C2-CO-like Transcription Factor Family AT1G78600 47.147 9.65e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi07g1137 zf-B_box 2e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g1137 07 16411977 16414381 Mibi07g1137 07 16411977 16414381 ECH