Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1136 ATGTCATCTTCCTCCTCCTATGAGATTGTTCTTACCAGCTCCCCTGATGGCCCCATAGTCGCCTATGATGCCTCCACGGGGGCCCCACTAACTCGCTTCCTAGGAACCCGGTCGCCCCGCCGCGGTCTCACGGTGGCCGGAAAAGGTGTCATAGCGGCGTCACATGTGTCACCGGACACGGCGGCAGTGTCCATTCACCTCTACAACTGGCACACTTCAAGTGTCCTTCATAGATTCTCTTCACCTGAGTTTGTGGCACCACTTGCCGCCACTCATGACGGCGGCTTTATATTTGCCGGAGGACAGTCAGGTAGTATCCATTGTTTCTCTGTTCCTTCTGGGGATGTTGTCAACTCTTTTCCTGCTCATACTAAGCCCATTTCTTGCCTTCAACTCACTCATGATGGGTCTTTGGTCATTTCAGGGAGTGATGATGGTAGCATTATGGTGATTCCAACATTTAAAATAGTAGAATCATCATCATCATCATCATTATCAAACTCAAAAGACATGATGATTGTGCAGCATATGAAGAAGGCACATTCAGATTCAGTGACAGCCTTGAGCACATCAATCACAGGCCTATCCACCAACAACAACTCCATGCTTGTCTCCTCCTCTCTGGACTCCACCTGCAAGTTCTGGAACCTTCTAGAAGGAACCCTCCTCCGCACTGTCTCCTTCCCTTGTCCCATTAATGGCCTCACCATACCCCAATTATCATCACCATTATTGTTCGCTGCTGGATCAGATGGGTGTGTTTACAAAGCAACAATCATAACCAAAAGCAGAAGAACACAGAACCATGAAGAAGAAGAAGAAGAAGTGGTAGTGGTGAAGAAGTGGGAGAATAGGAGCCATGTGGGGCCCACTGAATCAGTGGTAGTTGTGAATGGAGGGAGGAATCTGGTGTCTGCAGGTGAAGATGGGAGTGTGTGGATGTGGGATATTGAAACAGAACAGGTAGCAATGGTGATGAAGGATGATTATAATAATAACAGCAATAATAATAATGGAGGATTATTGATGGAGGGAATTGGCAGTAGTATAAGTGGTATGATAGTGGTGGTTAGTGGTGGGAATGATGAGTATAATAGAGGAAGAGGGAGTGGTGGGCATAACAACAACAACAACAATAATAATAGGTATGTGAGTTCAGGGAAGTTGTTGAAGGAAGAAGGGGTGAGGGAAATGAAGAAGATAATGGAGATGGGAGATGTGTTAAGGGAGGTGGAAGAAGACAAGAGGAGAGCCGTTAAGATGTTGGAGAATGCAATTGCTATGTATGAGAAGCTCTTGGAGCTCATTCTTGAATATGCTTTGAAGGGTGCTTGTAAAGATGATGATGATGAGAGTAGTGAAGGAGAAAAGGAGGAGAATGAGGATGATCAAGAAATTGGAGAGGAAGATGGCAATTAG 1419 0.4581 MSSSSSYEIVLTSSPDGPIVAYDASTGAPLTRFLGTRSPRRGLTVAGKGVIAASHVSPDTAAVSIHLYNWHTSSVLHRFSSPEFVAPLAATHDGGFIFAGGQSGSIHCFSVPSGDVVNSFPAHTKPISCLQLTHDGSLVISGSDDGSIMVIPTFKIVESSSSSSLSNSKDMMIVQHMKKAHSDSVTALSTSITGLSTNNNSMLVSSSLDSTCKFWNLLEGTLLRTVSFPCPINGLTIPQLSSPLLFAAGSDGCVYKATIITKSRRTQNHEEEEEEVVVVKKWENRSHVGPTESVVVVNGGRNLVSAGEDGSVWMWDIETEQVAMVMKDDYNNNSNNNNGGLLMEGIGSSISGMIVVVSGGNDEYNRGRGSGGHNNNNNNNNRYVSSGKLLKEEGVREMKKIMEMGDVLREVEEDKRRAVKMLENAIAMYEKLLELILEYALKGACKDDDDESSEGEKEENEDDQEIGEEDGN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1136 472 MobiDBLite consensus disorder prediction 446 472 - -
Mibi07g1136 472 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 284 319 - -
Mibi07g1136 472 Coils Coil 408 428 - -
Mibi07g1136 472 Gene3D - 1 174 IPR015943 GO:0005515
Mibi07g1136 472 MobiDBLite consensus disorder prediction 451 472 - -
Mibi07g1136 472 ProSiteProfiles Trp-Asp (WD) repeats profile. 120 150 IPR001680 GO:0005515
Mibi07g1136 472 Pfam Neurobeachin beta propeller domain 86 231 IPR046851 -
Mibi07g1136 472 MobiDBLite consensus disorder prediction 364 386 - -
Mibi07g1136 472 SMART WD40_4 219 258 IPR001680 GO:0005515
Mibi07g1136 472 SMART WD40_4 113 152 IPR001680 GO:0005515
Mibi07g1136 472 SMART WD40_4 275 316 IPR001680 GO:0005515
Mibi07g1136 472 SMART WD40_4 72 110 IPR001680 GO:0005515
Mibi07g1136 472 SMART WD40_4 170 216 IPR001680 GO:0005515
Mibi07g1136 472 PANTHER WD-REPEAT PROTEIN 18 8 439 IPR045227 -
Mibi07g1136 472 ProSiteProfiles Trp-Asp (WD) repeats profile. 284 325 IPR001680 GO:0005515
Mibi07g1136 472 ProSitePatterns Trp-Asp (WD) repeats signature. 303 317 IPR019775 -
Mibi07g1136 472 ProSiteProfiles Trp-Asp (WD) repeats profile. 178 225 IPR001680 GO:0005515
Mibi07g1136 472 ProSitePatterns Trp-Asp (WD) repeats signature. 203 217 IPR019775 -
Mibi07g1136 472 MobiDBLite consensus disorder prediction 368 386 - -
Mibi07g1136 472 Gene3D - 175 365 IPR015943 GO:0005515
Mibi07g1136 472 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 8 321 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1136 Mibi-ChrMibi07 16406201 16408228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1136 139 312 Eukaryotic Initiation Factors Gene Family AT2G46290 22.778 3.82e-07 50.1