Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1130 ATGATCTCTCTTTTCTTGGCTTCCTCTGCACTTGGAGCCACCAACATCCATCCATATGAAAAGGAAGCTCTGAGAAAGATAGCAAATACGATGGTAAAGACAAACTGGAACTTCAGTGTGGATCCATGCGACGGTTCTGATCCTGCCTTTGATAAAAGCAACTGGGTTGATCCAAACCCAGTGGATGAAGAAGATCAAAACGCTGTTGTATGCAATTGCTCCATTGCCGATGATGGCTTCTGTCATGTTGTCAACATAATTCTGAAGAAAAACAGTCTCCCGGGAAAACTCCCACCAGAACTCGTTGAATTACCTTACCTTTCCGTAATCGACCTTAGCCGCAACTACCTTAGTGGTTCAATCCCTCCAAGTTGGGCCTCCCTTCCACTAATGAACATTTCTCTTCTTGGTAATCGACTAACGGGTGAAATCCCAGTGGGGTTAACCAAGATCACTACTTTGGAAAGTTTAGTCCTTGAGTTCAATCAATTTTCTGGAAATCTTCCTCCTGAGCTTGGCAATCTTCTCAATCTTAAAAGACTGTTACTTACCTCCAACAACTTCACTGGAGAAATACCTCCTACTTTTGCAAAGCTTACTAATTTGACGGATATTCGACTAGGTGACAATCAATTTTCTGGGGAGATACCTAACTTTATTCAGAATTGGAAAAGTCTCAAGAGAATAGTGGTTCATGGGAGTGGCTTGAGTGGACCGATTTCTGGAATCTCATTTCCTGAAAACTTAGAATTCTTGATTATAAGTGACTTAAGTGGACCTGATTCAACTTTTCCTGCGCTCAAGAACTTGAAAAGATTGAGACAATTGATATTGAGGAGTTGCAATATCAATGGCACAATACCTCCCTATCTTGGGAGTATGGGCAGTTTAAAAATCTTAGACCTGAGCTTTAACAAATTGGAGGGAGAAATTCCAAAGGACTTTGATCACCTAACAAGCTTGGATTACATGTATTTAACTGGAAACCTTCTCTCTGGAGTTGAGCCGCCTACTTTCAAAGTTGAAAACATGGATTTTTCATATAACAGCTTTAACAGCTCAAACAGAGGGGATGAGAAGTGTGGTCACCCAAAACAGAATCTGTTTGGAGACCCTTTGACGGCCAATGACTCAAGATCTGTTACTTGTATGAGAAGCGCTTGTCCTAAAACCTGGTACTCTGTCAATATAAATTGTGGTGGGGATCGGGAAACCGATGGAGATACAACGTATGATGGTGATTTGAATCTAGGTAGCCAAGGATTTGCAAAGAGTCCGGGAACTAACTGGGCAATTAGCAGTACTGGTCACTTTTTAGATGCAAAACAAAAGGATAAATTTTCTTATGAAGTAGATAGGCTCTCTGTGCCCCCTGTTAATCTGTACAGGAATGCACATCTTTCTCCTATTTCTTTGACCTATTATGCATTTTGCCTGGGAAATGGACGGTACACAGTGAGTCTCCATTTTGTGGAGATAAGGTTCACTGATGATCAAACATATGGAAGCCTTGGAAGGCGTGTATTTGATGTCTACATTCAGGAACAGCGGGTGCTGAAGGATTTCAATATTGTAAAAGAAGCAGGGGGAGTTGGTAAACTAACCATACAAAAATTTCCTGCAAATGTGACTAGTGGCACCTTAAAGATTCGCTTCCATTGGGCTGGGAAAGGGACAACTGCCATACCAGAAAAGTCAGTTTATGGTCCTCTAATTTCAGCTATATCTGTAACTTCTGACTTTAAACCCCCAAGAAGCATCCCTGGAGCAGTTGTGGCTGCAATTGTGGCTGTAGGAGTGAGCATTGTAATCCTTATATTGGGCATACTCTGGTGGAGAGGTGCCCTTAGAAAAAGAAATTCATTAGCAATAGAGCTAAGGAGCTTAGACCTGCAAACTGGTTTGTTCACCTTGCGCCAAATCAAAGCAGCAACAAATAACTTTGATGCATCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGCTTTCTATCAGATGGCACAACAATAGCAGTGAAGCAGCTTTCTTCTAAATCGAATCAAGGAAACCGTGAGTTTATCAATGAGATAGGCATGATCTCTGCTTTGCAACACCCTTGTCTTGTTAAGCTCTATGGTTGTTGCGTTGAAGGGGATCAGTTGTTGTTGGTGTATGAATACATGGAAAACAATAGCCTTGCTCGTGCCTTGTTTGGACGAGAGGAGTGCCGTTTAAAATTGGATTGGCCAACAAGACAGAATATTTGTGTTCAAATTGCTCGAGGTTTGGCTTTCCTCCATGAAGAATCAAGACTAAAGATTGTTCACCGGGATATCAAGGCCACTAATGTGCTCCTTGACAAAGACCTGAATGCAAAAATATCAGATTTTGGACTTGCCAAGCTTTCCGAAGAGGACAACACCCATATAAGCACTCGAATTGCTGGGACCTATGGATATATGGCACCTGAGTATGCAATGCATGGTTATTTGACTGACAAAGCAGATGTCTATAGTTTCGGAATTGTCGCTCTAGAAATCGTAAGTGGAAGGAGTAACACTCTTCGCCGGCATAAAGAAGACGGTTTCAATCTTCTTAATTGGGCACATGTTTTGAAAGAGAATGGCTATCTAATGGAGCTGGTTGATTCAAGGTTGGGTTCAGAATTTGACAGAGAGGAGGTAATGGTGATGATCAATGTGGCTCTCCTATGCACCAATCCATCTTCATCTCTCAGGCCCGCCATGTCTTCAGTGCTAAGCATGCTTGAAGGAAGAACTTTAGTTCCAGAAATAATTTCTGATCAAAGTGTGGAAGCAAGTAAGATGAAGTTGGAGGCAATGAGACAATATTACCGAGAGGTAGAAGAAAATGATGAGACTGAAACTCATTCCAAGAGTCTCTTAGGGATGTCCACTTCTTCATCTACTTCAGCTAGAGATCTCTATCCTGTTCGCCTAGATTCTTCCTACTTCGAGAAAAGAAAATCTGAGACAGGATAA 2991 0.4169 MISLFLASSALGATNIHPYEKEALRKIANTMVKTNWNFSVDPCDGSDPAFDKSNWVDPNPVDEEDQNAVVCNCSIADDGFCHVVNIILKKNSLPGKLPPELVELPYLSVIDLSRNYLSGSIPPSWASLPLMNISLLGNRLTGEIPVGLTKITTLESLVLEFNQFSGNLPPELGNLLNLKRLLLTSNNFTGEIPPTFAKLTNLTDIRLGDNQFSGEIPNFIQNWKSLKRIVVHGSGLSGPISGISFPENLEFLIISDLSGPDSTFPALKNLKRLRQLILRSCNINGTIPPYLGSMGSLKILDLSFNKLEGEIPKDFDHLTSLDYMYLTGNLLSGVEPPTFKVENMDFSYNSFNSSNRGDEKCGHPKQNLFGDPLTANDSRSVTCMRSACPKTWYSVNINCGGDRETDGDTTYDGDLNLGSQGFAKSPGTNWAISSTGHFLDAKQKDKFSYEVDRLSVPPVNLYRNAHLSPISLTYYAFCLGNGRYTVSLHFVEIRFTDDQTYGSLGRRVFDVYIQEQRVLKDFNIVKEAGGVGKLTIQKFPANVTSGTLKIRFHWAGKGTTAIPEKSVYGPLISAISVTSDFKPPRSIPGAVVAAIVAVGVSIVILILGILWWRGALRKRNSLAIELRSLDLQTGLFTLRQIKAATNNFDASNKIGEGGFGPVYKGFLSDGTTIAVKQLSSKSNQGNREFINEIGMISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGREECRLKLDWPTRQNICVQIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLSEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNTLRRHKEDGFNLLNWAHVLKENGYLMELVDSRLGSEFDREEVMVMINVALLCTNPSSSLRPAMSSVLSMLEGRTLVPEIISDQSVEASKMKLEAMRQYYREVEENDETETHSKSLLGMSTSSSTSARDLYPVRLDSSYFEKRKSETG 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1130 996 Gene3D Ribonuclease Inhibitor 185 245 IPR032675 -
Mibi07g1130 996 Coils Coil 934 954 - -
Mibi07g1130 996 MobiDBLite consensus disorder prediction 952 976 - -
Mibi07g1130 996 MobiDBLite consensus disorder prediction 961 976 - -
Mibi07g1130 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 770 782 IPR008271 GO:0004672|GO:0006468
Mibi07g1130 996 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 23 950 - -
Mibi07g1130 996 SUPERFAMILY Protein kinase-like (PK-like) 632 932 IPR011009 -
Mibi07g1130 996 Gene3D Ribonuclease Inhibitor 19 184 IPR032675 -
Mibi07g1130 996 Gene3D Ribonuclease Inhibitor 246 361 IPR032675 -
Mibi07g1130 996 Pfam Leucine rich repeat 272 331 IPR001611 GO:0005515
Mibi07g1130 996 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 617 723 - -
Mibi07g1130 996 Pfam Leucine Rich Repeat 177 199 IPR001611 GO:0005515
Mibi07g1130 996 Gene3D Phosphorylase Kinase; domain 1 613 723 - -
Mibi07g1130 996 ProSiteProfiles Protein kinase domain profile. 648 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1130 996 Gene3D - 392 581 - -
Mibi07g1130 996 SMART serkin_6 648 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1130 996 Gene3D Transferase(Phosphotransferase) domain 1 724 934 - -
Mibi07g1130 996 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 392 580 - -
Mibi07g1130 996 CDD STKc_IRAK 654 921 - -
Mibi07g1130 996 SUPERFAMILY L domain-like 77 349 - -
Mibi07g1130 996 FunFam Putative LRR receptor-like serine/threonine-protein kinase 724 931 - -
Mibi07g1130 996 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 22 192 - -
Mibi07g1130 996 Pfam Protein tyrosine and serine/threonine kinase 651 864 IPR001245 GO:0004672|GO:0006468
Mibi07g1130 996 Pfam Malectin domain 394 575 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1130 Mibi-ChrMibi07 16327743 16342146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1130 4 975 Receptor kinase-like Gene Family AT1G53420 52.535 0.0 953
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi07g1130 PK_Tyr_Ser-Thr 5.1e-48 CL0016