Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1128 ATGGAGTTAGCGAATCCAAGTTGTAAACTTTTCTTTATTTTGGCAATGGGAGTATTGGCTCTTCATGTCTTTATATTCTGTGGATGTAACGCTCAGCAAATACCAGATGATGAAGTGAGAGCTCTAAAGGCAATATCTTCAAAGATGAAGGATTTAAATTGGACGGTGAGCCCAAACTCTTGTACAGACGGAGGCTTTAAAAATCAGAGCATTGTGGGGAACGACATTATTAGGAATGTTACCTGTAATTGCACTTTCTCCAATGGAAAGGTTTGCCATGTTACCCATATCGAGCTGAAGGGTCTCAATCTATCTGGAAGTATACCAAGTGAGTTTGGTAATCTTTCCCAACTGCAAGAACTAGATTTGACTCGCAACTATCTGAATGGCTCAATCCCAAAGAGCTTTGCTAAGCTTCCTCTTGTAGTAATATCACTTCTGGCTAATCGACTCAGTGGTCCAATTCCAAAGGAAATTGGCGAAATTTCAACTTTGGAGGAGCTAGTGTTGGAAGACAATCGTTTAGAAGGAACTCTTCCTTCTAGTCTCGGAAAATTGAAGCATTTACGCAGATTGCTTCTTTCTTCAAATAATTTCTCGGGGAACATCCCTGAAAGTTTTGGCAATCTAACGAAATTAGAAGATTTTAGGTTAGATGGAACCAACATATCAGGAAGATTACCCATTTTTATTGGGAACTGGACCAATCTTGATAGATTGGATCTGCAGGGAACTTCCATGGAAGGCCCAATTCCTCCAACCGTAGCTTTGTTAACAAATTTGACTCAATTGAGAATATGTGATTTGAATGGAAATACAACAATGAGATTTCCTAATCTAGAGAGTTTGAAATCCTTGAAACAATTGGTGTTGAGAAATTGCTCAATCACTGGGTCCATTCCAGATTACATTGCTCATATGGATCAGTTAGTTACTCTAGATTTGAGCTTCAACAAGTTGACAGGTGGAATCCCAGAAGGAATAGATAACTTGAAAAAACTAGATTACATGTTTTTGACTCACAATTCTTTGAGTGGAAAGATACCAGGATGGATACTAGTAAACAAAAATAACTTGGATTTATCTTACAACAATTTCTCAGAGACTTCTGCTAAGATTTGTCAGCTCAAGGATGTAAACTTGGCTTCAAGCCTTTCATCTTCAGCAAATACCCCAATTACTTGCCTGAAAAAGGACTTTCCTTGTGGAGGAAAACCCAAGTACCACTCATTGTTCATAAACTGTGGAGGGTCAGAAATGGATGATCAAGGGAATACCTATGAAAGTGACCTTGGTCAAGAAGGCATTTCATTTTTCAGTCCTTCTGGGGACAAATGGGCTTATAGTAGCACAGGAACATATTTAGGAAATGCTAAAGCTGATTATATTGCAAGAAATACATTTTCTCTCAACATTACTGGTCCAAGCTTCTATCAGACAGCTCGTCTTTCCCCATTGTCCCTAAAGTATCATGGCTTCTGTTTGCTTAATGGAAATTACAAAGTCAGGCTTTATTTTGCTGAGATTATGTTTTCTAATGACCAAAAATTCAGCAACCTTGGGCGGCGCATATTTGATGTTTCAATTCAAGGTAGGAAATATTTGAGTGATTTTAACATTGTGGAGGCAGCCGGTGGCGTCGGTAAAGGAATGTTCACGGATTTCAACGTCAATGTGACTGACAACACATTGGAGATCCATTTGTACTGGGCAGGGAAAGGAACTACAGCTATCCCTACTAGAGGTGTATATGGACCTCTTATATCTGCTATTTCAGTAACCCCAAACTTTGCAATTCCTTCAGAAGGGCTTTCTGCTGGAGCCATTGCTGGCATTGTGGTTGGATCATGTGTGTTACTTGTACTGATATTGTTTGTCCTTCGAAGGATGGGTTTCTTAGGTGGGAAAGATCCAAAAGACAAAGAACTATTAGATTTGAAAACGGGCTATTTCTCTTTAAGACAAATTAAAGCCGCCACAGGTAACTTTTCTCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCAGTGTACAAGGGTGTATTATCAGATGGTACTGTCATAGCTGTTAAGCAACTCTCCTCCAAATCAAAGCAAGGAAATCGTGAATTTGTTAATGAAATAGGAATGATTTCTGCTTTGCAACATCCAAATCTTGTGAAGCTTTTTGGCTGCTGCATTGAAGGAAACCAGTTGTTATTGATATATGAGTACTTGGAGAATAACTCTCTTGCTCGAGCTCTTTTTGGTCGTGAAGAACAGAAATTACACTTAGATTGGCCTACAAGAATGAAAATCTGTGCAGGGATAGCAAGAGGATTGGCATATCTTCATGAGGAATCAAGGTTAAAAATTGTCCATAGGGATATTAAGGCAACAAATGTCTTACTTGATAAGGATTTGAATGCCAAGATCTCTGACTTTGGTTTGGCCAAGCTTGACGAAGAAGAGAATACTCATATCAGCACAAGAATTGCAGGAACAATTGGTTATATGGCTCCTGAGTATGCAATGCGGGGCTACTTGACTGACAAAGCAGATGTTTATAGCTTTGGGGTTGTTGCTTTAGAGATTGTGAGCGGAAAAAGCAATACAAATTACAGACCAAAGGAGGAGTTTGTTTATCTTCTTGACTGGGCCTATGTTCTTGAAGAACAAGGAAACCTACTTGAGTTGGTGGATCCAAGCCTTGGTTCGAGCTATTCCTCGGACGAAGCCATGAGAATGCTGGAGGTGGCACTCTTATGTACTAATCCATCTCCAACTCTTAGACCACACATGTCCTCTGTTATTAGCATGCTTGAAGGAGACTCGCCGGTCGAAGCACCACCGGTACTCAAGCACCGGGAGGGTGACCAAGATGCAAGATTCAAGGCTTTTGAGATGCTGTCACAAGACAGCCAAAGCCAAACCTTTGTTTATTCTACATTATCACAGGAAAGCATGGAGCAAAGACTTCAATCAATGGGTCCATGGGTTGATTCCTCTGCTTCTCTTCCAAGTAAAGATGTCACTTCATCTGATAAGCCTCTTAGGGATTCCAATGTATAA 3051 0.4002 MELANPSCKLFFILAMGVLALHVFIFCGCNAQQIPDDEVRALKAISSKMKDLNWTVSPNSCTDGGFKNQSIVGNDIIRNVTCNCTFSNGKVCHVTHIELKGLNLSGSIPSEFGNLSQLQELDLTRNYLNGSIPKSFAKLPLVVISLLANRLSGPIPKEIGEISTLEELVLEDNRLEGTLPSSLGKLKHLRRLLLSSNNFSGNIPESFGNLTKLEDFRLDGTNISGRLPIFIGNWTNLDRLDLQGTSMEGPIPPTVALLTNLTQLRICDLNGNTTMRFPNLESLKSLKQLVLRNCSITGSIPDYIAHMDQLVTLDLSFNKLTGGIPEGIDNLKKLDYMFLTHNSLSGKIPGWILVNKNNLDLSYNNFSETSAKICQLKDVNLASSLSSSANTPITCLKKDFPCGGKPKYHSLFINCGGSEMDDQGNTYESDLGQEGISFFSPSGDKWAYSSTGTYLGNAKADYIARNTFSLNITGPSFYQTARLSPLSLKYHGFCLLNGNYKVRLYFAEIMFSNDQKFSNLGRRIFDVSIQGRKYLSDFNIVEAAGGVGKGMFTDFNVNVTDNTLEIHLYWAGKGTTAIPTRGVYGPLISAISVTPNFAIPSEGLSAGAIAGIVVGSCVLLVLILFVLRRMGFLGGKDPKDKELLDLKTGYFSLRQIKAATGNFSPENKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLFGCCIEGNQLLLIYEYLENNSLARALFGREEQKLHLDWPTRMKICAGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLEEQGNLLELVDPSLGSSYSSDEAMRMLEVALLCTNPSPTLRPHMSSVISMLEGDSPVEAPPVLKHREGDQDARFKAFEMLSQDSQSQTFVYSTLSQESMEQRLQSMGPWVDSSASLPSKDVTSSDKPLRDSNV 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1128 1016 Pfam Leucine rich repeat 164 223 IPR001611 GO:0005515
Mibi07g1128 1016 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
Mibi07g1128 1016 Gene3D Phosphorylase Kinase; domain 1 635 738 - -
Mibi07g1128 1016 Gene3D Transferase(Phosphotransferase) domain 1 739 942 - -
Mibi07g1128 1016 Gene3D Ribonuclease Inhibitor 277 398 IPR032675 -
Mibi07g1128 1016 Gene3D Ribonuclease Inhibitor 38 164 IPR032675 -
Mibi07g1128 1016 Pfam Protein tyrosine and serine/threonine kinase 666 891 IPR001245 GO:0004672|GO:0006468
Mibi07g1128 1016 MobiDBLite consensus disorder prediction 984 1016 - -
Mibi07g1128 1016 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 25 968 - -
Mibi07g1128 1016 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 35 270 - -
Mibi07g1128 1016 MobiDBLite consensus disorder prediction 984 1005 - -
Mibi07g1128 1016 Pfam Malectin domain 411 591 IPR021720 -
Mibi07g1128 1016 Pfam Leucine Rich Repeat 117 139 IPR001611 GO:0005515
Mibi07g1128 1016 SUPERFAMILY Protein kinase-like (PK-like) 647 935 IPR011009 -
Mibi07g1128 1016 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 738 - -
Mibi07g1128 1016 SUPERFAMILY L domain-like 76 395 - -
Mibi07g1128 1016 FunFam Putative LRR receptor-like serine/threonine-protein kinase 739 945 - -
Mibi07g1128 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Mibi07g1128 1016 Gene3D - 409 596 - -
Mibi07g1128 1016 ProSiteProfiles Protein kinase domain profile. 663 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1128 1016 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 408 596 - -
Mibi07g1128 1016 CDD STKc_IRAK 669 936 - -
Mibi07g1128 1016 SMART serkin_6 663 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1128 1016 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 278 369 - -
Mibi07g1128 1016 Gene3D Ribonuclease Inhibitor 167 276 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1128 Mibi-ChrMibi07 16279493 16290893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1128 11 1005 Receptor kinase-like Gene Family AT1G53440 59.744 0.0 1188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi07g1128 PK_Tyr_Ser-Thr 6.2e-49 CL0016