Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1123 ATGAATAGAGGTGGATACCGTTACGGTGGCGGCGGTGTAAGAGGCCACCGCCCCCACCAAGGACCTCAGCCTCACAATGATCCTTCAGGGAGAGGGAGATACAGAGGAGAAAACAGTGGATCGCTTCAATCTCCCAATTCTTATATTGATTCTGGTCCAGCTCCTAAACGACGACAAATTTCACAACCGCTTTCAAACCCCTTTCATGAGTCGAAAGATAAGATTTTACCCATTCATAGGCCTGACAAAGGTGGTACATCAGCAGCTCGAACTAGAAAGTTTCGTGTCAATCACTTTCCACTCAAGTTCAGGCCTGATACTATACTGATTCATTACAATGTTGATGTGAAGCTCATTTCACCTGTTCGACCTATTGCATCACAAAGAATATTAAAATCTGACCTCTCTATGATTAGGGAGACATTGTTCTCTATTGCTATCTCAGCAGGGGATGATGAAAGAAGCTATTCTTATGAGGTCACCTTAACACTTGTTAATAAGCTTGAGTATCGAAAGTTGAGACAATACCTCAATAAAGAGCTTATCATGCCAATTCCTAGAGACATTTTGCAAGGGATGGATATAGTGTTCAAGGAAAATCCAGCCACGCGCACAATCTGTTTGGGACGGCATAGCTTCTTTCCTTCAGATCCTCCTTTGTTACATCAGGATTTTCGCAATGGCATGATTGCACTAGGAGCATTTCAACACAGTTTGAAGCCTACATCTCAGGGTTTATTGGAAGGTTTTGGGCGTTTCAGGAATCGCGTTGAGAAGGAATTGATTGGATTAAAAGTAAATGTGACACACCGTAGAACCAAACAAAAATACACCATTGCAAGGTTATCGAATCGTATCACAAGGGATATCACATTTACTTTTATGGACCCAGATGGCTGGAATGACCCGCAGGAAGTCAGAATACTTGACTATTTCTTGGATAAATACAATAAGAACATTGCATACAAAGATATTCCTTGTTTAGATCTTGGGAGAGGTGTCTATGTGCCAATGGAGTTTTGCATATTAATTGAGGGTCAGAGATATCCCAAAGAGGATTTGGATAAAAGCGCTTCTATGACATTGAAAAATATGTCATTGGCCACTCCAAAGGTGAGACAGAGTGTTATACAAGCGATGGTGGAATCAAGTGATGGACCTTGCGGTGGTGGTATTATTCAAAATTTTGGGATGGAAGTCAATACAACCATGACTACTGTTGTAGGACGCATTATTGAGCCACCAAAACTGAAAGTAGGTGGTAGAAATGACCAGATCATGACCATAACGTTGGATCCAGAGAAATGTCATTGGAATCTGGTTGGAAAAACTGTGATAAAAGGCAAGTCAGTTGAGCATTGGGGCATTATTGATTTTACAAGCTCAGAGTCAGATTTCCGGTTCAAATTAAGATACAGGGAATTCATTCCTAAGCTCAAGAACAAATTTAGAAGTATGGGCATTTACATGAACGATCCTCTTTGGGTCGAAGGATCTTCGATGCATCAACTTGCAAGTCACAGTTCTCTATCTGCATTACTTGAGAAAGTGAAAGGCTGGGATCATCAGGTACAATTAATTCTATGTATGATGTCTCAAAAACGTTTTGGGTATAAGATGCTCAAGTGGATTTCAGAGACCAAGATTGGTGGTGTAGTGGCTCAATGTTGTTTGGCTGGTACTATGAATACAGGGAAAGATCAGAATCTCACAAATCTTGCTCTTAAGATCAATGCCAAACTTGGTGGTAGCAATGTTGAACTTGAGAATACTAGGCTTCCTTGCTTTGCTAGTGATCGTGGGGATGTTATGTTTACAGGGGCAGATGTCAATCATCCTGCTGCTCGAGATGTTAATAGTCTATCGATTGCTACGGTGGTCGGGACTGTCAATTGGCTTGCTGCAAATCGGTATGTGGCACGTGTTAGCCCTCAAAATCATCAGAGTGAACGAATATTAAATTTTGGCTCAATTTGTCACGAGCTTGTGGACTGTTACACAAGGTTGAATAGAGTGAGACCAGAAAAAATTGTCATTTTCCGTCATGGGGTGAGTGAGGGTCAGTTTGATATGGTTCTTAATGAAGAGCTACAAGATGTGAAAAATGTGTTCCAAAATGAAAACTATTTTCCAACGATAACCTTGATTGTAGCACAAAAGCAGCATCAGACTCGATTTTTCCGAGAGCAAGCTTCTGCTGGAAATGTGTCTCCCGGGACAGTGGTGGATACAAAAGTGGTACATCCTTTTGAGTTTGACTTCTACCTTTGCAGTCACTATGGAAGCTTAGGGACAAGCAAGCCAACTCATTACCATGTCTTATGGGATGAGAACATGTTTACCTCTGATGAGTTACAAAAACTCATATATGATATGTGCTTTACCTTTGTAAGGTGCACTAAACCTGTGTCTTTGGTCCCTCCTGTGTACTATGCCAACCTTGTTGCCTATCGAGGACGACTATATTATGAAGCAAAGACAGAGTTGGATCCTTCATCTGCAAATGAAAACAAGTATTTCAAGCTGCACAATCACCTGAAAGACATGATGTTCTTTGTCTAA 2562 0.411 MNRGGYRYGGGGVRGHRPHQGPQPHNDPSGRGRYRGENSGSLQSPNSYIDSGPAPKRRQISQPLSNPFHESKDKILPIHRPDKGGTSAARTRKFRVNHFPLKFRPDTILIHYNVDVKLISPVRPIASQRILKSDLSMIRETLFSIAISAGDDERSYSYEVTLTLVNKLEYRKLRQYLNKELIMPIPRDILQGMDIVFKENPATRTICLGRHSFFPSDPPLLHQDFRNGMIALGAFQHSLKPTSQGLLEGFGRFRNRVEKELIGLKVNVTHRRTKQKYTIARLSNRITRDITFTFMDPDGWNDPQEVRILDYFLDKYNKNIAYKDIPCLDLGRGVYVPMEFCILIEGQRYPKEDLDKSASMTLKNMSLATPKVRQSVIQAMVESSDGPCGGGIIQNFGMEVNTTMTTVVGRIIEPPKLKVGGRNDQIMTITLDPEKCHWNLVGKTVIKGKSVEHWGIIDFTSSESDFRFKLRYREFIPKLKNKFRSMGIYMNDPLWVEGSSMHQLASHSSLSALLEKVKGWDHQVQLILCMMSQKRFGYKMLKWISETKIGGVVAQCCLAGTMNTGKDQNLTNLALKINAKLGGSNVELENTRLPCFASDRGDVMFTGADVNHPAARDVNSLSIATVVGTVNWLAANRYVARVSPQNHQSERILNFGSICHELVDCYTRLNRVRPEKIVIFRHGVSEGQFDMVLNEELQDVKNVFQNENYFPTITLIVAQKQHQTRFFREQASAGNVSPGTVVDTKVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDENMFTSDELQKLIYDMCFTFVRCTKPVSLVPPVYYANLVAYRGRLYYEAKTELDPSSANENKYFKLHNHLKDMMFFV 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1123 853 Gene3D paz domain 240 349 - -
Mibi07g1123 853 MobiDBLite consensus disorder prediction 36 50 - -
Mibi07g1123 853 MobiDBLite consensus disorder prediction 1 91 - -
Mibi07g1123 853 ProSiteProfiles PAZ domain profile. 256 345 IPR003100 GO:0005515
Mibi07g1123 853 Gene3D - 411 590 - -
Mibi07g1123 853 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 90 827 - -
Mibi07g1123 853 SUPERFAMILY Ribonuclease H-like 521 824 IPR012337 -
Mibi07g1123 853 ProSiteProfiles Piwi domain profile. 551 824 IPR003165 GO:0003676
Mibi07g1123 853 CDD Piwi_ago-like 392 823 IPR045246 -
Mibi07g1123 853 Pfam PAZ domain 252 357 IPR003100 GO:0005515
Mibi07g1123 853 SUPERFAMILY PAZ domain 250 382 IPR036085 GO:0005515
Mibi07g1123 853 Gene3D - 598 853 IPR036397 GO:0003676
Mibi07g1123 853 MobiDBLite consensus disorder prediction 72 89 - -
Mibi07g1123 853 SMART PAZ_2_a_3 244 368 IPR003100 GO:0005515
Mibi07g1123 853 SMART Piwi_a_2 526 824 IPR003165 GO:0003676
Mibi07g1123 853 CDD PAZ_argonaute_like 254 344 - -
Mibi07g1123 853 Pfam Piwi domain 527 823 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1123 Mibi-ChrMibi07 16232378 16237078 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1123 139 835 Eukaryotic Initiation Factors Gene Family AT1G48410 33.290 4.32e-110 360