Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1121 ATGCCAATTCCTAGAGACATTTTGCAAGGGATGGATATAGTGTTCAAGGAAAATCCAGCCAAGCGCACAATCTGTTTGGGACGGCATAGCTTCTTTCCTTCAGATCCTCCTTTGTTACATCAGGATTTTCGCAATGGCATAATTGCACTAGGAGGATTTCGATACAGTTTGAAGCCTACATCTCAGGGTTTGTCCTTATGTTTGGACTATTCAGTTGTGTCTTTTCGAAAGCGAATGTCAGTCTTGGATTTTCTATATGAGCGTATTGATGGTTTTGGATTGGAAGGTTTTGGGCGTTTCAGGAATCGCGTTGAGAAGGAATTGATTGGATTAAAAGTAAATGCGACACACCGTAGAACCGAACAAAAATACACCATAGCAAGGTTATCGAATCGTATCACAAGGGATATCACATTTACTTTTATGGACCCAAATGGCCGGAAGGACCCGCAGGAAGTCAGAATTCTTGACTATTTTCGGGATAAATACAATAAGAACATTGCATACAAAGATATTCCTTGTTTAGATCTTGGGAGAGGTGTCTATGTGCCAATGGAGTTTTGCATATTAATTGAGGGTCAGAGATATCCCAAAGAGGATTTGGATAAAAACGCTTCTATGACATTGAAAAATATGTCATTGGCCACTCCAAAGGTGAGACAGAGTGTTATACAAGCGATGGTGGAATCAAGTGATGGACCTTGCGGTTCTCTATCTGCATTACTTGAGAAAGTGAAAGGCTGGGATCATCAAGTACAATTAATTCTATGTGTGATGTCTCAAAAACGTTTTGGGTATAAGATGCTTAAGTGGATTTCAGAGACCAAGATTGGTGTAGTGACTCAATGTTGTTTGGCTGGTACAGTGAATACAGGGAAAGATCAGAATCTCACAAATTTTGCACTTAAGATCAATGCCAAACTTGGTGGTAGCAATGTTGAGCTTGAGAATACTAGGCTTCCTTGCTTTGCTAGTGATCGTGGGGATGTTATGTTTATAGGGGCTGATGTCAATCATTGA 1020 0.402 MPIPRDILQGMDIVFKENPAKRTICLGRHSFFPSDPPLLHQDFRNGIIALGGFRYSLKPTSQGLSLCLDYSVVSFRKRMSVLDFLYERIDGFGLEGFGRFRNRVEKELIGLKVNATHRRTEQKYTIARLSNRITRDITFTFMDPNGRKDPQEVRILDYFRDKYNKNIAYKDIPCLDLGRGVYVPMEFCILIEGQRYPKEDLDKNASMTLKNMSLATPKVRQSVIQAMVESSDGPCGSLSALLEKVKGWDHQVQLILCVMSQKRFGYKMLKWISETKIGVVTQCCLAGTVNTGKDQNLTNFALKINAKLGGSNVELENTRLPCFASDRGDVMFIGADVNH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1121 339 FunFam Protein argonaute 7 73 196 - -
Mibi07g1121 339 Pfam PAZ domain 99 205 IPR003100 GO:0005515
Mibi07g1121 339 Pfam Piwi domain 255 339 IPR003165 GO:0003676
Mibi07g1121 339 SUPERFAMILY Ribonuclease H-like 249 339 IPR012337 -
Mibi07g1121 339 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 249 339 - -
Mibi07g1121 339 CDD PAZ_argonaute_like 79 191 - -
Mibi07g1121 339 Gene3D - 192 319 - -
Mibi07g1121 339 ProSiteProfiles Piwi domain profile. 254 339 IPR003165 GO:0003676
Mibi07g1121 339 SUPERFAMILY PAZ domain 75 229 IPR036085 GO:0005515
Mibi07g1121 339 ProSiteProfiles PAZ domain profile. 103 192 IPR003100 GO:0005515
Mibi07g1121 339 Gene3D paz domain 73 191 - -
Mibi07g1121 339 SMART PAZ_2_a_3 83 215 IPR003100 GO:0005515
Mibi07g1121 339 Pfam Argonaute linker 1 domain 29 77 IPR014811 -
Mibi07g1121 339 SMART DUF1785_2 25 78 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1121 Mibi-ChrMibi07 16070763 16072564 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1121 266 339 Eukaryotic Initiation Factors Gene Family AT1G48410 46.753 9.31e-11 61.2