Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1076 ATGGTTAGCAGTAGTAGTAGTAGTAGTAGTGTGTGCAGTCTCCGTACATGTTGCCGCCGTTTTTCCCTCCTCCCGGAGACACCGCTTTTCACGCCACCTCGTTTCTCTCTTCCTCGCCGGTGCCGGCGGACTCTGTTCTCTCATACTTGCTACAACAACAAGAATGAGACTAAAGAGAAGGTCATTGTGATTTCTGGGCCCACCGGCGCCGGTAAATCTCGTCTTGCTTTGGAACTCGCCAAGCGCCTCAATGGCGAAATTGTCAGTGCCGACTCTGTCCAGGTGTACCAAGGTCTTGATGTTGGATCCGCTAAACCCTCCCCAAATGATAGAAAGGAGGTAAAACATCATTTGGTTGACATGTTGCATCCATCTAAAGACTATTCAGTTGGACAATTTTTTGAGGATGCAAGGCAAGCTACAAGATGTATCCTTGACAATGGCCGTGTTCCAATAGTTGTTGGGGGAACTGGGTTGTATTTAAGATGGTTTATATATGGAAAACCAGATGTTCCCAAAGCCTCTCCAGATGTCAAATCCCAAGTATATTCACAGTTAGCTGCACTGCGTAAAAATGAGGATTGGGATGCTGCTGTGCAGTTGGTGGTAGATGCAGGTGACACGAAGGCCCAAACTTTAGCAATGAATGATTGGTATAGATTACGGCGTAGCCTAGAGATTATCAAGTCTAGTGGGTCACCTCCATCTGCTTTTCGGGTGCCATATGATTCTTTCAAGGAAGGGAGTGATTATAGTGATACCGATGGTATTGAATCTTCTGATGTCAAAATTTCTTGTGATCCAATGGAAGACTCCAAGTTCTCAGATTTGCCTTATCAGTTCATATGCTTCTTCCTTTCGAGGCAGAGACTTGACCTATATAAAGCAATCGACCAGCGGTGTGAAGATATGCTATTAGAAAGGGATGGGATTCTGTCTGAGGCTCGTTGGCTTCTAAAGTTGGGTCTTCATCCAAACTCCAATTCTGCAACACGAGCAATTGGTTATAGACAAGCTATGGAATACTTACTCAGATGCCAACAACATGGGGGGCAAAGTTCAGCTGAAGAATTTTTCAATTTTTTGTCTGAATTTCAAAAAGAAACCAGGAATTTTGCAAAAAGACAATTTACATGGTTTCGCAATGAGCATATATACGCTTGGCTTGACGCTTCCAAGCCACAGAATGCAATTATTGAATTCATGGACAATGCATATCATGATTGGAGTGGAAATCTCATTGTGCCTGAACACCTTAGAATGTCTAGAGATGTACCTAATCGTCAAGAAGCTGCTCAACTTAAGTCTTACCGCACAAAAAATAGGCATTTCATGAAAGATGAAGATTGTTCTCATATTCTGGAGTGGGTGAATAAGAAAGACTGA 1386 0.4322 MVSSSSSSSSVCSLRTCCRRFSLLPETPLFTPPRFSLPRRCRRTLFSHTCYNNKNETKEKVIVISGPTGAGKSRLALELAKRLNGEIVSADSVQVYQGLDVGSAKPSPNDRKEVKHHLVDMLHPSKDYSVGQFFEDARQATRCILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASPDVKSQVYSQLAALRKNEDWDAAVQLVVDAGDTKAQTLAMNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFKEGSDYSDTDGIESSDVKISCDPMEDSKFSDLPYQFICFFLSRQRLDLYKAIDQRCEDMLLERDGILSEARWLLKLGLHPNSNSATRAIGYRQAMEYLLRCQQHGGQSSAEEFFNFLSEFQKETRNFAKRQFTWFRNEHIYAWLDASKPQNAIIEFMDNAYHDWSGNLIVPEHLRMSRDVPNRQEAAQLKSYRTKNRHFMKDEDCSHILEWVNKKD 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1076 461 Hamap tRNA dimethylallyltransferase [miaA]. 61 403 IPR018022 GO:0008033
Mibi07g1076 461 FunFam tRNA dimethylallyltransferase 9 169 240 - -
Mibi07g1076 461 Pfam IPP transferase 94 383 - -
Mibi07g1076 461 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 58 388 IPR039657 -
Mibi07g1076 461 Gene3D - 170 240 - -
Mibi07g1076 461 Gene3D - 58 453 IPR027417 -
Mibi07g1076 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 187 IPR027417 -
Mibi07g1076 461 TIGRFAM miaA: tRNA dimethylallyltransferase 61 238 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1076 Mibi-ChrMibi07 14910195 14921808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1076 64 238 C2H2 Transcription Factor Family AT2G27760 27.322 9.54e-17 80.5