Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1070 ATGAATGGCAGGTACTTTTGCTTGCTTCACCACAACAACAACAAATCCCTGCTTCTTCCTCAGTCTTCACTGCTTCACTTCCCACATCATCATCATCAATATCACCATCACTCTCCCTTCTTCTTCTTCTTCTTCTTCAGCCCCAATCACTGTAAATCCCAGTCATCTTCAAAACCCCCCATTAACAAGTCCTTCTTCTTAAGAATTCTGGATCCTCAAAGCAACCACCTCCATCACTTTTACCACCTCCACCATTTCCCTCCTCAAAACCCTCTTCATGTAGAACCCCATCAAGAACACACCTACCAAGATCCCTCCTTTTCTCCTTCCCCAAAAGACCCATCTCTCCATTTCCACCTTCAATACCAACAACAACAACAAAACCACTCTCCTTATCCCTTAGACCAACCTCCCAAGAAACGGCCTTATCTCCTACCTCCTCCTTCTCCGGCGACCTATTCTTCTTCTTCCCTTACAGCCACCGTTGAACATGCGACAAAAATGGAGGAAACTGCGAATCATCAACACCGTCCGGCGTCGAGACTAGCCGTTAGAGGCGGAATAGGAGAGATAGTGGAGGTACAAGGCGGCCACATTGTTCGTTCCACCGGAAGAAAAGACCGACACAGTAAGGTTTGTACGGCTAAAGGACCGAGAGATCGGAGAGTTCGTCTCTCCGCTCACACCGCCATTCAATTCTACGACGTACAAGACCGATTAGGCTACGACCGTCCAAGTAAGGCCGTCGATTGGCTCATCAAGAACGCCAAATCCGCCATTGATGAGCTCGCTAAGCTCCCCGCGTGGAACCCTAATATTTCTGTAGATCAAAATTCGCAGGAAGAGAAAGATGGAGAGCAGAATAAGAATGAAATTGGAGTTGAAACTTGTACGACGGCGGAGGAATTAGGTGAAAACCCTAATAACCACGGTTGTGGGCCCGGCTTTCTTCCGCCGTCGACTTTGGGAGCTGAAATTGCTGACTCCATAAAGTCTTTCTTCCCGATGGAGACGAATTCTTCTACTTCCTCTTCCGCGATTCAGTTTCAGAATTACAGAAGTACCACTAGTACGGCCTGCCAGAATAATAGTAGTAATAATAATAATAATAATCAAGATCTACGTCTCTCCCTTCAGTCATTTCAGGACCCGATTCTGCTTCACCAACCTCAAAATCAACAGAATGAGCACTTGTTCTCTGCAACGACCCAATTAGGGTTTGATGGTTCTTCTTTCCCTGAAGAACACAGTCGATTGCAGAGGATGATGGCTTGGAATAATAATAATGGTGGCGGCGGCGAAGGCGGCGGAGGAGGAGGATTTATCTTCAACTCGCCGTCGCTGATGCCGATGCCGATGCCGACTCTGCCGCCGATACTATTCGGGCAGAGTCAGTATTTATCTCAGAGGGGACCCCTTCAGTCCATCTTCTGTTTCCGGTGGCATCGGATTTGA 1455 0.4763 MNGRYFCLLHHNNNKSLLLPQSSLLHFPHHHHQYHHHSPFFFFFFFSPNHCKSQSSSKPPINKSFFLRILDPQSNHLHHFYHLHHFPPQNPLHVEPHQEHTYQDPSFSPSPKDPSLHFHLQYQQQQQNHSPYPLDQPPKKRPYLLPPPSPATYSSSSLTATVEHATKMEETANHQHRPASRLAVRGGIGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKSAIDELAKLPAWNPNISVDQNSQEEKDGEQNKNEIGVETCTTAEELGENPNNHGCGPGFLPPSTLGAEIADSIKSFFPMETNSSTSSSAIQFQNYRSTTSTACQNNSSNNNNNNQDLRLSLQSFQDPILLHQPQNQQNEHLFSATTQLGFDGSSFPEEHSRLQRMMAWNNNNGGGGEGGGGGGFIFNSPSLMPMPMPTLPPILFGQSQYLSQRGPLQSIFCFRWHRI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1070 484 MobiDBLite consensus disorder prediction 135 149 - -
Mibi07g1070 484 Pfam TCP family transcription factor 204 370 IPR017887 -
Mibi07g1070 484 MobiDBLite consensus disorder prediction 117 133 - -
Mibi07g1070 484 ProSiteProfiles TCP domain profile. 205 263 IPR017887 -
Mibi07g1070 484 MobiDBLite consensus disorder prediction 89 155 - -
Mibi07g1070 484 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 176 474 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1070 Mibi-ChrMibi07 14795465 14797038 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1070 186 476 TCP Transcription Factor Family AT1G53230 49.837 1.83e-75 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mibi07g1070 TCP 2.1e-32 No_clan