Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1055 ATGAAGCACTTGGCATTGCTTTCGGAAAAATTTCAAAAGCACAATGCCACTCATGTGACGCAGGATTTGCATGTGTACTGTGTGTCTAAGTATGCCAAAAATGATCAGAAATTAGCACATTTTGACCACATAGATGAGATGACTGATTCAGATATGGATCAACAAAGGCATGGGAATTTTAATCCTGAACCTACTATCCTTGTGAGTAGTGGACATATTTTGCAGCCAAATATACCCGCAGTGGCAACAGCTACAGGGAACACTAGTAATCGTGAGTCCCACTATGTACCCGATGTCTATGACAATGCGGAAACATATAGAGGGACCCCATACAATGCCATTCAGAATCAGCACAACCTTGATATGGGTGGTGCGGCTGTGACCAACTTGCATTATTCTGGCACGAATCCTTCTTCTAGCACTGGTGTGTTTCCTCTCCCTACTAATCACATATCATATGATCAGTTGCCAGCATCGAGCACATTTTCTGTGTCTGGAGTTTCTTCAGATAATTTCGGAAGGAGCAGCAGTTATGCAGCTGACGTCAGAGCTACATTCAAAAGAAAAAATGCTGAGACTCTTAGAGGCAATGCCCCACATTTTGATGCATCAGCTAGTTCTTCAGTTGTTCCCCCAAATGCAAGGCACTCTGATGGGGTTACCATGATGGATCCCACTTCCTTGCCCCTGCCTCAATTCCCAGTAAATAATGTCCCTTCACCCATGGAATTAGGTCCTCATGGTAGTTTGTGGAGCAGGTCAGTTGAGTCTGTTATGATTCATGAACATAGCCATTTGATTCAAGGCAATTATTTAGGGCAACCCTTCCAGTCAGTTGCTCCTCCCTGGTTGGATCAACCGATGAATAACTGTCATTGTGATGGACATGCTACAGCTTGGAATCAGTCTCTTCCATTGCCTTATATGCAAGCACCCAATGCTAATGGAAGTTCATTAGAGAATGCAAATATGGGTTTGCAGAGATACCATGATGCAGCAAGTAACATGAATGGCCTTAGGCGTGTTAATCCTTCTGTCAGCCATCAGCACCATAATTATCATCATCATCCGGCAATGACGATGAGAGGATTCAGAGGCCACAATATCAATTTTCAACCTCCAGTAACTGCAGCTTCTTATAGAGTTCCAATAAATCCTTTACACAATGCTGTGATCCCCTTACAGAATGGTTTTGAGATGGGTCATAGGCATGTTGGCCTCGTACCATCAGCAGGCATGTACATATATCATCCTCATAGAGGATACATGAACGGGACAGTAATTGGGCATCAAAATCTTCACCCTACGGGGTATCTCCAAGTTGATGATGTTGCAGTACTGGATGAAGTGGGATTGGTTGACCATCACAGAGAAATGCGCTTGGACATAGAGGATATGACTTATGAGGAGCTTCTTGCATTGGGTGAGCAAATTGGTAATGTAAGAACTGGTTTATCAGAAGAGTCCATTTCAGCTTCAATGAAAACTAGAGTTCATGCAACTATTATTAACCTGGAAGAGGAAGAAACTCCGGTGGATGAGGAAGCTGGTCCATGCATAATATGCCTGGAAAATTATAAGGACACAGAGAAGATAGGAATCCTTCCATGTGGTCATGAGTATCATGCAGATTGCGTGAAGACATGGCTTATTGAGAAAAATATCTGTCCCATATGCAAAGAAGTAGGGTTGACTCCTGAAGAGGACAAAGGCGTATAG 1719 0.4311 MKHLALLSEKFQKHNATHVTQDLHVYCVSKYAKNDQKLAHFDHIDEMTDSDMDQQRHGNFNPEPTILVSSGHILQPNIPAVATATGNTSNRESHYVPDVYDNAETYRGTPYNAIQNQHNLDMGGAAVTNLHYSGTNPSSSTGVFPLPTNHISYDQLPASSTFSVSGVSSDNFGRSSSYAADVRATFKRKNAETLRGNAPHFDASASSSVVPPNARHSDGVTMMDPTSLPLPQFPVNNVPSPMELGPHGSLWSRSVESVMIHEHSHLIQGNYLGQPFQSVAPPWLDQPMNNCHCDGHATAWNQSLPLPYMQAPNANGSSLENANMGLQRYHDAASNMNGLRRVNPSVSHQHHNYHHHPAMTMRGFRGHNINFQPPVTAASYRVPINPLHNAVIPLQNGFEMGHRHVGLVPSAGMYIYHPHRGYMNGTVIGHQNLHPTGYLQVDDVAVLDEVGLVDHHREMRLDIEDMTYEELLALGEQIGNVRTGLSEESISASMKTRVHATIINLEEEETPVDEEAGPCIICLENYKDTEKIGILPCGHEYHADCVKTWLIEKNICPICKEVGLTPEEDKGV 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1055 572 SMART ring_2 519 559 IPR001841 -
Mibi07g1055 572 ProSiteProfiles Zinc finger RING-type profile. 519 560 IPR001841 -
Mibi07g1055 572 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 477 563 IPR013083 -
Mibi07g1055 572 SUPERFAMILY RING/U-box 518 562 - -
Mibi07g1055 572 Pfam Ring finger domain 519 560 IPR001841 -
Mibi07g1055 572 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 119 563 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1055 Mibi-ChrMibi07 14552618 14556704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1055 439 564 C3H Transcription Factor Family AT2G15530 47.727 1.02e-32 131