Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1046 ATGGAGTCCTATTACCCCTCTTCATCCTCCACAGATTTCAACAATGAAAACACTCACTTGCCTCCTGGCTTTCGCTTCCACCCTACAGATGAAGAACTCATCACTTACTACCTCCTCAAGAAAGTCCTTGACAATACCTTCACTGGTAGAGCCATTGCTGAAGTTGACCTCAACAAATGTGAGCCATGGGAGCTTCCAGAGAAAGCAAAGATGGGGGAGAAAGAGTGGTACTTTTTTAGTCTTAGAGATAGGAAGTACCCAACAGGGCTAAGGACTAATAGGGCTACAGAAGCAGGATACTGGAAGGCCACTGGGAAAGACAGAGAAATCTATAGCTCAAAGAATAATTGTGGCTTAGTTGGCATGAAGAAGACTCTTGTGTTCTACAGAGGAAGAGCTCCTAAAGGTGAAAAAAGCAACTGGGTTATGCATGAGTATCGCCTTGAAGGCAAATTTGCCTACCATTACCTCTCTCGCTCCTCCAAGGATGAGTGGGTCATTTCCCGAGTCTTCCAGAAAAGCGGCGCCGGATCCGGCGCCGGCGGTGGCTCCGCCGCCATGTCCTCCTCATGCAGTGGCTCAAAGAAGACACGTCATCACATCATGTCCTCTACTTCCAACTTAAGCCTCTACCCAGCTGAACCAAGCTCTCCCTCCTCCGTCTACCTCCCACCTCTTCTTGATTCCTCTCCCTTCTCCGCCGCCGCCGCCGCCGTAGTCAACGACCGTGACAGCTGCTCCAACAACACTTACGACACCTTAACAAACAACAACAACAATGTTACCACCTCAAGAGAGCACGTGTCCTGTTTCTCCACAATCTCTGCCACTAACAATTACGGTTTTGACCTTCCGGTGACGGCGGCGGACCCGTTTGCTCGGTTTCTGAGAAACGGCGGCGCCGGCGCGTTCCCGAGCTTGAGGTCGCTTCACCTACAAGACAGCCTTCAGCTTCCATTTTTTATTCCTCCGCCGCCAGCTCCGCCGCTGCAGCAGCAGCCGTTTCAGGGTATTCCGGTGGACATGAGCTGGGCTACGCCGGTGGTGGCGGAGCAGAGGGTGGCGGACTGTGGCTCCGGCATGACCACTTTGGGTGGTTCTGAGCTTGATTGCATGTGGGGGTTTTAG 1128 0.523 MESYYPSSSSTDFNNENTHLPPGFRFHPTDEELITYYLLKKVLDNTFTGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKNNCGLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKSGAGSGAGGGSAAMSSSCSGSKKTRHHIMSSTSNLSLYPAEPSSPSSVYLPPLLDSSPFSAAAAAVVNDRDSCSNNTYDTLTNNNNNVTTSREHVSCFSTISATNNYGFDLPVTAADPFARFLRNGGAGAFPSLRSLHLQDSLQLPFFIPPPPAPPLQQQPFQGIPVDMSWATPVVAEQRVADCGSGMTTLGGSELDCMWGF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1046 375 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 248 - -
Mibi07g1046 375 FunFam NAC domain-containing protein 100-like 29 177 - -
Mibi07g1046 375 Pfam No apical meristem (NAM) protein 21 148 IPR003441 GO:0003677|GO:0006355
Mibi07g1046 375 MobiDBLite consensus disorder prediction 183 197 - -
Mibi07g1046 375 SUPERFAMILY NAC domain 13 173 IPR036093 GO:0003677|GO:0006355
Mibi07g1046 375 ProSiteProfiles NAC domain profile. 20 173 IPR003441 GO:0003677|GO:0006355
Mibi07g1046 375 MobiDBLite consensus disorder prediction 176 197 - -
Mibi07g1046 375 Gene3D NAC domain 29 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1046 Mibi-ChrMibi07 14396368 14398395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1046 12 375 NAC Transcription Factor Family AT5G53950 53.061 3.20e-106 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi07g1046 NAM 4.9e-41 No_clan