Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1036 ATGGAGAGGAAGAGAACTTTAGTTGAGAAGGTAAGGAAAGATAACAACATAGTTGAAGAAGAAGAAGTAGAGGATGAGATAGAAGAGGAAGAAGAAAGCGGTGGTGGAGGTGATAATGGCGTTGCAGAAGAGCAGAAGAGGAAAGGTGTCATGGTAAGTGGAAGAAGAGGGTCAAGTGGGTGTGGTGGAGTTTCTCCACCTTCCTGTCAGGCAGAGAGATGTGGAGCTGATCTGAGTGATGCAAAGAGGTACCATCGCCGCCACAGGGTGTGCGAGTTCCACTCCAAGGCACCAGTTGTCATGGTTGCCGGGCTAAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGACTTGGGGGAATTTGATGAAGCCAAGAGAAGCTGCCGAAGGCGTTTGGCTGGGCACAACGAACGTCGCCGCAAAAGCACAGGCGAAATTTACAATGAGAGCTGCAGCCGTGGCAAAGGTCCTCATGCAAAGGAGAGCTATTGCAGGCATGCTGATGATAGAGGAAGAGTTCAAATGAGTGTTTCTGGGAGTTCTGGCTACAAATCTTTTCACATAAAATAA 573 0.4869 MERKRTLVEKVRKDNNIVEEEEVEDEIEEEEESGGGGDNGVAEEQKRKGVMVSGRRGSSGCGGVSPPSCQAERCGADLSDAKRYHRRHRVCEFHSKAPVVMVAGLRQRFCQQCSRFHDLGEFDEAKRSCRRRLAGHNERRRKSTGEIYNESCSRGKGPHAKESYCRHADDRGRVQMSVSGSSGYKSFHIK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1036 190 MobiDBLite consensus disorder prediction 134 166 - -
Mibi07g1036 190 MobiDBLite consensus disorder prediction 19 37 - -
Mibi07g1036 190 MobiDBLite consensus disorder prediction 1 62 - -
Mibi07g1036 190 SUPERFAMILY SBT domain 67 147 IPR036893 GO:0003677|GO:0005634
Mibi07g1036 190 Gene3D - 60 130 IPR036893 GO:0003677|GO:0005634
Mibi07g1036 190 MobiDBLite consensus disorder prediction 1 18 - -
Mibi07g1036 190 FunFam Squamosa promoter-binding-like protein 14 61 130 - -
Mibi07g1036 190 Pfam SBP domain 69 142 IPR004333 GO:0003677
Mibi07g1036 190 Coils Coil 1 33 - -
Mibi07g1036 190 ProSiteProfiles Zinc finger SBP-type profile. 66 143 IPR004333 GO:0003677
Mibi07g1036 190 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 41 160 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1036 Mibi-ChrMibi07 14284727 14285867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1036 52 154 SBP-box Gene Family AT1G53160 68.269 2.20e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi07g1036 SBP 8.4e-32 No_clan