Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1035 ATGGTAGTATTGAGATATTTCTTGATGTGTTTTCTCCAATGGGGTTTTTTGGCCTGCTTTCTTTCCCTATCTCTGGGTCTGAATTCCCCAACCCCATCTTGTGATTCTCGTGATCTGTTGGCTCTGAGGCAATTTGCAGGTAACCTCACAAATAGGGCTAATATTACATCATGGTCTTCTGATAGTGATTGCTGCAAATGGGTTGGAGTTTTGTGTGATAATGTGACTGCTGAGGCGACTGCTAAAAGAGTGACCAAGTTGATTCTGCCTCGAATGGGTCTCAAAGGGGAAATTTCTGCTTCTCTAGCTCAATTGGATCACTTAATTGTGCTTGATCTTTCCTTCAATCATCTCCAAGGTGCGTTGCCCGCAGAATTCTCCAAGTTGAAGATGTTGAAGATTCTGGATTTGAGCCATAATATGTTGTTAGGACCTGTTTCTGAAGCTCTCTCTGGTTTGGAATCCATTCAAAAACTGAACATTTCCAGTAATTCATTTGTTGGAAACCTCTCTGAGCTTGGGGGATTCCCTCATCTTGTTTCATTCAACATAAGCAACAATTCATTCAAGGGTCAGTTCAGTTCTCAAATTTGCAGTAAGGGGCTTCGTGTGCTTGACTTATCTGCGAATGACTTCGCTGGTGGCCTTGAAGGCTTGGACAAATGTAACACATCTCTTCAGGAGTTGCATTTGGATAATAATTTATTTTCAGGCCCTCTTCCAGATGCCTTGTACTCATTGTCAGCCTTGGAGCAATTCTCAGTATCTGCGAACAATATCTCTGGTCAGTTAAGCACACAACTAAGTAAGCTCTCTAGCCTAAAGTCTATAGTTATTTCTGGGAACCAGTTTTCTGGGGTACTCCCGAATGTGTTTGGGAATTTGTCAAATTTAGAACAATTAGCAGCACATTCCAATTCATTCTCTGGGTCATTGCCATCTAGCCTGGCTTTATGCTCAAAGCTTCGGGTGCTTGATCTTCGAAACAACTCTCTTGCTGGTCAAATTGATCTCAATTTCACTGGATTGTCTAATCTGTGTAACCTTGATCTTGCATCTAATCACTTTATTGGCCCTCTTCCTAGTTCCTTATCTTATTGCCGTGAATTGAAAGTTTTGAGCCTTGCTAAGAATGGGTTGACTGGTTCAATTCCTGAGAACTATGCAAACCTTTCATCGTTGTTCTTTGTGTCTTTCTCAAACAACAGCTTAGAGAACTTATCTGGTGCGCTGTCGGTGCTGCAGCATTGTAAGAACCTCACTACACTTATCCTCTCAAAGAATTTCCATGGTGAGGTAATACCGGAAAGTGTTTCAGGCTTTGAGAGCCTTATGGTTTTAGCATTGGGGAACTGTGGTCTCAAAGGCCAGGTCCCTGCTTGGCTATTGAATTGCAGCAAATTATCAGTCCTTGATTTATCTTGGAACCAACTGGATGGTAGTATCCCTTCTTGGATTGGTAAAATCGACAATTTGTTCTACCTGGATTTCTCAAACAATTCTTTCGTGGGAGAAATGCCGAAGAGTTTGACACAGTTGAAGGGTCTTGTGTGTACCAATTGCACTAGACCGAATTTGTCTTTATCCGCTGGTGTTCCTCTCTATGTTAAGAGAAACAAGAGTCTCAATGGTCTGCCATACAACCAGGCTTCAAGTTTCCCTCCTTCATTACTATTGAGCAATAACAGATTGAATGGAACGATATGGCCTGAAATCGGGCAACTCAAAGCACTGCATGTCTTGGATTTGAGCAGGAATGAGATCTCTGGTACAATTCCTAGCAGTATTTCAGAGATGGAGAACTTGGAAACATTAGATCTGTCATATAATGATCTCTCTGGAGTGATCCCTTCAACCTTTAACAGCCTCACATTCTTGTCAAAGTTCAGTGTGGCATATAATCATTTGCAGGGGCAAATTCCAAGTGGGGGACAGTTTCTTAGCTTTCCTGGTACAAGTTTTGAGGGAAACCCGGGACTTTGTGGCGCAATAATTTCTCCATGCAAACCCAACAATGCGGGATGGGGACCCAATATGCCTTCTGGTTCTTCCAGCAGATTTGGTAGAAACAATGTCCTTGGTATAACAATCAGTATAGGTGTAGGGCTTGCCCTGCTTCTTGCCATTGTTCTGCTGAAAGTATCAAAAAGGGATGAAGAGAAGCCGGTTGAAAACTTCGATGAGGAATCGGGTCGGCCCCCAAGGTTATCTGAAGGACTTGTTTCTTCAAAATTGGTTCTTTTTCAGAATTCTGATTGCAAAGATCTGACAGTTTCAGATTTGTTAAAATCCACAAACAATTTCAACCAGGCAAACATTATTGGTTGTGGTGGGTTTGGTCTAGTGTACAAGGCAAATCTTCCAAATGGTGCGAAAGCTGCGGTCAAGAGACTTTCTGGGGACTGTGGTCAGATGGAGCGTGAATTCCAAGCTGAAGTAGAGGCCCTTTCCAGAGCTCAGCACAAGAATCTTGTCTCTCTTAAAGGTTACTGCCGGCATGGCAATGTCAGATTGTTGATTTATTCCTACCTGGAGAATGGAAGTTTGGATTACTGGCTGCATGAGTGTGTGGATGCAGATTCAGCTCTGAAATGGGATGTGAGACTCAAGATTGCAAAAGGTGCTGCTCATGGATTAGCTTACTTGCACAAGGGGTGTGAGCCGTTCATCGTTCATCGTGATGTTAAATCTAGTAATATACTTTTAGATGATAAATTTGAAGCTCATTTGGCTGATTTCGGACTTTCAAGGCTACTGCAGCCTTATGACACCCATGTTACAACAGATTTAGTGGGTACATTGGGATATATTCCACCAGAGTACAGTCAGACACTAACAGCAACCTTCAGGGGCGATGTCTATAGCTTTGGTGTTGTTCTTCTCGAGCTTCTTACCGGTAGAAGGCCGGTGGAAGTCATCAAGGGTAAAAACTGCAGGAACCTGGTATTTTGGGTGTTTCAGATGAAGTCTGAAAACAAGGAGCAAGAAATTTTCGACCCAGTCATTTGGGACAAGGATCATGAGAAGCAGCTCTTGGAGGTACTGGCCATTGCTTGTAGATGCTTGGACCAGGAACCAAGGCAAAGACCCTCTATTGAAGAAGTCGTTTCGTCGCTTGATCGTGTAGGAGCTGATGGTTTACAACAACAATGA 3153 0.4285 MVVLRYFLMCFLQWGFLACFLSLSLGLNSPTPSCDSRDLLALRQFAGNLTNRANITSWSSDSDCCKWVGVLCDNVTAEATAKRVTKLILPRMGLKGEISASLAQLDHLIVLDLSFNHLQGALPAEFSKLKMLKILDLSHNMLLGPVSEALSGLESIQKLNISSNSFVGNLSELGGFPHLVSFNISNNSFKGQFSSQICSKGLRVLDLSANDFAGGLEGLDKCNTSLQELHLDNNLFSGPLPDALYSLSALEQFSVSANNISGQLSTQLSKLSSLKSIVISGNQFSGVLPNVFGNLSNLEQLAAHSNSFSGSLPSSLALCSKLRVLDLRNNSLAGQIDLNFTGLSNLCNLDLASNHFIGPLPSSLSYCRELKVLSLAKNGLTGSIPENYANLSSLFFVSFSNNSLENLSGALSVLQHCKNLTTLILSKNFHGEVIPESVSGFESLMVLALGNCGLKGQVPAWLLNCSKLSVLDLSWNQLDGSIPSWIGKIDNLFYLDFSNNSFVGEMPKSLTQLKGLVCTNCTRPNLSLSAGVPLYVKRNKSLNGLPYNQASSFPPSLLLSNNRLNGTIWPEIGQLKALHVLDLSRNEISGTIPSSISEMENLETLDLSYNDLSGVIPSTFNSLTFLSKFSVAYNHLQGQIPSGGQFLSFPGTSFEGNPGLCGAIISPCKPNNAGWGPNMPSGSSSRFGRNNVLGITISIGVGLALLLAIVLLKVSKRDEEKPVENFDEESGRPPRLSEGLVSSKLVLFQNSDCKDLTVSDLLKSTNNFNQANIIGCGGFGLVYKANLPNGAKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNVRLLIYSYLENGSLDYWLHECVDADSALKWDVRLKIAKGAAHGLAYLHKGCEPFIVHRDVKSSNILLDDKFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVFWVFQMKSENKEQEIFDPVIWDKDHEKQLLEVLAIACRCLDQEPRQRPSIEEVVSSLDRVGADGLQQQ 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1035 1050 SMART LRR_typ_2 599 622 IPR003591 -
Mibi07g1035 1050 SMART LRR_typ_2 575 598 IPR003591 -
Mibi07g1035 1050 SMART LRR_typ_2 105 128 IPR003591 -
Mibi07g1035 1050 SMART LRR_typ_2 129 152 IPR003591 -
Mibi07g1035 1050 SMART LRR_typ_2 391 414 IPR003591 -
Mibi07g1035 1050 SMART LRR_typ_2 343 367 IPR003591 -
Mibi07g1035 1050 SMART LRR_typ_2 271 294 IPR003591 -
Mibi07g1035 1050 ProSiteProfiles Leucine-rich repeat profile. 601 622 IPR001611 GO:0005515
Mibi07g1035 1050 SUPERFAMILY RNI-like 228 640 - -
Mibi07g1035 1050 FunFam Leucine-rich repeat receptor-like kinase 38 156 - -
Mibi07g1035 1050 Gene3D Ribonuclease Inhibitor 167 260 IPR032675 -
Mibi07g1035 1050 SMART serkin_6 768 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1035 1050 Pfam Leucine rich repeat 577 636 IPR001611 GO:0005515
Mibi07g1035 1050 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Mibi07g1035 1050 Pfam Leucine rich repeat 419 478 IPR001611 GO:0005515
Mibi07g1035 1050 FunFam Phytosulfokine receptor 1 732 843 - -
Mibi07g1035 1050 Pfam Leucine rich repeat N-terminal domain 37 73 IPR013210 -
Mibi07g1035 1050 ProSiteProfiles Protein kinase domain profile. 768 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1035 1050 FunFam Tyrosine-sulfated glycopeptide receptor 1 340 673 - -
Mibi07g1035 1050 SUPERFAMILY Protein kinase-like (PK-like) 748 1039 IPR011009 -
Mibi07g1035 1050 Pfam Protein kinase domain 769 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1035 1050 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 241 336 - -
Mibi07g1035 1050 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Mibi07g1035 1050 Gene3D Ribonuclease Inhibitor 261 362 IPR032675 -
Mibi07g1035 1050 Gene3D Ribonuclease Inhibitor 365 674 IPR032675 -
Mibi07g1035 1050 PANTHER LEUCINE RICH REPEAT KINASE 2 271 1041 - -
Mibi07g1035 1050 FunFam Leucine-rich repeat receptor-like protein kinase 844 1049 - -
Mibi07g1035 1050 Gene3D Phosphorylase Kinase; domain 1 736 843 - -
Mibi07g1035 1050 SMART LRR_sd22_2 247 273 - -
Mibi07g1035 1050 SMART LRR_sd22_2 575 604 - -
Mibi07g1035 1050 SMART LRR_sd22_2 129 155 - -
Mibi07g1035 1050 SMART LRR_sd22_2 319 351 - -
Mibi07g1035 1050 Gene3D Transferase(Phosphotransferase) domain 1 844 1048 - -
Mibi07g1035 1050 Gene3D Ribonuclease Inhibitor 37 155 IPR032675 -
Mibi07g1035 1050 PRINTS Leucine-rich repeat signature 599 612 - -
Mibi07g1035 1050 PRINTS Leucine-rich repeat signature 578 591 - -
Mibi07g1035 1050 ProSitePatterns Protein kinases ATP-binding region signature. 774 796 IPR017441 GO:0005524
Mibi07g1035 1050 SUPERFAMILY L domain-like 57 309 - -
Mibi07g1035 1050 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1035 Mibi-ChrMibi07 14261872 14265024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1035 39 1045 Receptor kinase-like Gene Family AT1G55610 33.451 2.39e-162 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mibi07g1035 Pkinase 1.5e-43 CL0016