Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1021 ATGGGTTGCGCTTGTTGCAAGCCCTCAGCCATTGATGACAGTAGGGAGAGTCCAAGGGAGCGATTATCAAATAAGGCTTCATTCGACTCTCGTGGATCTAGGGCTACTTCATCGAGGAGGGAGGATGGTTATCGAGTGAAGGATAGATATGATAATAATGATGGTAGAAGTGCATCCATGGATAAACAAGGAAATGGCTCTGTTCGTTTACAAGTTGATAATTTTGAAAGGAAGAGAGAGAAACCAGAGTATGTTGTTGCGCAGCATCCAGGAGTTGGTAGTGTTCCAAAAGCCATAGAAGGGGAGCAGGTTGCAGCTGGGTGGCCTTCATGGTTGGCTGCAGTTGCTGGAGAGGCTATCAAGGGATGGTTGCCACGACGAGCAGATTCTTTTGAGAAGTTGGATAAAATTGGTCAGGGAACTTATAGCAATGTTTATAGGGCTCGTGATCTTGAACATAAGAAAATTGTTGCTTTGAAAAAAGTGAGATTCGATAATCTTGAACCTGAGAGTGTTCGCTTCATGGCAAGGGAAATTCACATTCTTCGTAGGCTTGATCATCCAAATGTTATAAAACTGGAAGGTCTGGTTACATCAAGGATGTCTTGCAGTCTATACCTTGTTTTTGAGTACATGGAACATGACTTGGCTGGGCTTGCTTCACATCCTGGACTAAAGTTTACTGAAGCACAGGTCAAATGTTACATGCAGCAACTTTTACGTGGACTTGATCACTGCCACAGCTGTGGTGTACTGCATCGTGATATTAAGGGATCCAACCTTCTTATTGACAACAGTGGAGTCTTGAAGATTGCGGACTTTGGTCTGGCAAGCTTTTATAATCCCAATCAAATTCAGCCATTGACTAGCAGAGTTGTCACGCTTTGGTATCGGCCTCCAGAGCTTCTGCTTGGAGCAACTTACTATGGCGCTGCAGTAGATTTATGGAGCACAGGCTGCATACTTGCCGAGCTGTATGCTGGAAAGCCTATTATGCCAGGAAGAACTGAGGTTGAACAGTTGCATAAAATTTTCAAACTTTGTGGCTCACCTTCTGAGGATTATTGGAGGAAGTCGAAGCTACCTCATGCAACAATATTTAAGCCCCAACAGCCCTACAGGCGGTGTGTTGCAGACACATTTAAGGAGTTTCCTGCACCTGCATTAGGCCTCATGGAAACCCTTTTATCTATAGATCCTGCTGATCGTGGAACTGCAGCATCTGCTTTGATGAGTGAGTTCTTCACAACAAAACCCTTACCTTGTGATCCTTCAAGTTTGCCCAAGTATCCTCCGAGCAAGGAATTTGATGCCAAAGCACGGGATGAAGAGGCTAGAAGACAAGGAGCTCTTGGAAGCAAGGCCCATAGACACGGGACAAGAGAGTCTCGTGCTGTCCCTGCACCTGATGCTAATGCTGAACTGGTCCTATCCATGCAGAAGAGACAAGGTCATTCCAACTCTAAGAGCCGAAGCGAGAAGTTTAACCCTCATCCTGAAGAAGTTGCTTCAGGATTTCCCATTGATCCCCCTAGGCCATCACAGGTTGTGGAAGTAGGCATAGATCACCAGGTACAGCAACATAAGAGAGCTTCCCATTCAGGTCCACTTTGTAACCGCACTGCATGGACAAAAGCCGGGAAAAACCCGGATGACGCCCCAAAGATCTCTAATGGGGGTGACTTGTCAGCAATGTCCGGCTTAGTCGCGGCGAGAAGGAGTATGTTATCTGATGATCGCAGGGAAAGGTCCGGATCATCACACTCAGAGGTTCCAAAACTAATAAGCCGGTTCCCGGGATCCTTGAAGGAGGCCTCTGAATCATTGGCTCAACATGAACAGAAGCATGCTGGAGCCCCTCCTCCTAAGGAAGAAGGGAGATGCAGCAACAAAGACCCGATTCCTGTTGGTTATGGGTCCAAGGGCCATAAAATTCATTATTCTGGTCCATTGTTAGTTCCATCTAGCAACACAGATCAGATGTTGAAGGACCACGATCGCCAAATTCAAGAAGTCGTCCGAAGAGCGCGATTGGACAAGGCGAAGATGAGGAGACTTCAGGCTGAAGGGAACAACAACCAGATAACCACCAATTCATTATTTGTTTCTGGTCGCTGA 2118 0.4636 MGCACCKPSAIDDSRESPRERLSNKASFDSRGSRATSSRREDGYRVKDRYDNNDGRSASMDKQGNGSVRLQVDNFERKREKPEYVVAQHPGVGSVPKAIEGEQVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEHKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLRGLDHCHSCGVLHRDIKGSNLLIDNSGVLKIADFGLASFYNPNQIQPLTSRVVTLWYRPPELLLGATYYGAAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVADTFKEFPAPALGLMETLLSIDPADRGTAASALMSEFFTTKPLPCDPSSLPKYPPSKEFDAKARDEEARRQGALGSKAHRHGTRESRAVPAPDANAELVLSMQKRQGHSNSKSRSEKFNPHPEEVASGFPIDPPRPSQVVEVGIDHQVQQHKRASHSGPLCNRTAWTKAGKNPDDAPKISNGGDLSAMSGLVAARRSMLSDDRRERSGSSHSEVPKLISRFPGSLKEASESLAQHEQKHAGAPPPKEEGRCSNKDPIPVGYGSKGHKIHYSGPLLVPSSNTDQMLKDHDRQIQEVVRRARLDKAKMRRLQAEGNNNQITTNSLFVSGR 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1021 705 Gene3D Transferase(Phosphotransferase) domain 1 214 453 - -
Mibi07g1021 705 MobiDBLite consensus disorder prediction 574 588 - -
Mibi07g1021 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Mibi07g1021 705 Gene3D Phosphorylase Kinase; domain 1 118 213 - -
Mibi07g1021 705 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Mibi07g1021 705 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1021 705 MobiDBLite consensus disorder prediction 527 642 - -
Mibi07g1021 705 CDD STKc_CDK9_like 131 415 - -
Mibi07g1021 705 MobiDBLite consensus disorder prediction 34 56 - -
Mibi07g1021 705 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1021 705 PANTHER CELL DIVISION PROTEIN KINASE 129 421 - -
Mibi07g1021 705 SUPERFAMILY Protein kinase-like (PK-like) 125 423 IPR011009 -
Mibi07g1021 705 FunFam probable serine/threonine-protein kinase At1g54610 214 455 - -
Mibi07g1021 705 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Mibi07g1021 705 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1021 705 MobiDBLite consensus disorder prediction 421 514 - -
Mibi07g1021 705 MobiDBLite consensus disorder prediction 12 27 - -
Mibi07g1021 705 MobiDBLite consensus disorder prediction 434 464 - -
Mibi07g1021 705 Coils Coil 669 689 - -
Mibi07g1021 705 MobiDBLite consensus disorder prediction 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1021 Mibi-ChrMibi07 14026812 14032425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1021 123 447 Core Cell Cycle Gene Families AT5G10270 54.252 5.63e-119 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi07g1021 Pkinase 3.2e-68 CL0016