Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1017 ATGAACCGATCAATCGAGCTGCCACCGCTACCCCAATTTTCGTTACGGAATTCAAAGTCCTTTTCTTTCTCTTTAAAGTTGAGTGGAGTATTTTTAGGTAGCAATTCGCCGTTGATGGACCCTGACGTTGTGGAAATCTCTCCCCCAATTCATCACCCTTCGAAACTGATGAAACAGAAGGCTATTATTAGTGATGTGATTGACATCGACAATGATGATGACTCTGCTGATTTAGTGTTTATTGGCGAAAATGTTGGTGGAAGCAGGAAGGGAAAGGAAATGTCTGGTGATATTTGTTCCCCACCTACACTTGAACATTTCGGACCAGCTAGTGGGCTTGCGTCCTCCAGTGGTTATGCCTCTGTATCACATAACGTAATTAATGTTGATGGTCACAGTTCTGATGTATCAAATGATGACGACGACTATAATGATCATTTTGCTGAAGATATAATGGATGTCGATGAGTATGACATGTTACAGGCACACTTTGACCATGTGAATCTACCTGCTGGAATTGAGGCACCCATTCCTTGGATGTCAAATTTTGATCTAGATTTGAAGAAATCTGAAAGTAGTTCTTCGAATCCTTGGGGTAATATGCAGTTAGATGTTAATAGTTCTCATGGTACAGACTTATCTCAGCTTTCATGGGAAACAGGGTCTTCTGACTACATCCAACATACTCTAGTACATAGTTCTAGTTCACTGATAAATAATGTTGCCATTGATCCTCCTGCTCAAAAGTTGTCCTCTCAATTACATTCTGAAGCTGCTTCCAATAAAAAGCAATCAAGTCCATCACAAGTTGATGGGCTTAAGATGAACTTGAATCTAGCACCAGGGGCAGATTCGTCCTTACATCATTGGTTCAAGGGACCTTCCAGTCGTAATAAGAAGCTTTCTATGTTGAATGAACTTCATTATGATGCTTTAGCACACAAGTCAGAGTCCTTGAAGCTGCTGCCTGGAGGCGAACCCCCTTATTGGGCGAAAGCTAAAAGTGCAAAGGCGTATGGCAAAGATGCTCAGTTCCATTCAAATTTCTTTCCGCCTTTTGAAGGGCCACACCATTTTCTGGAACCATCAAACACTAATATGTGGAAGATTCCTCCTAACCTGCCTTTTACAGATCATTCGGATAATTTAGGTTTTTATTATCCATTTGATCCTCTTGATGGCCCTCTTCCACCAATGATGGGTAATACTTGGTTTCACAATAATGCCAGTGATGAAAAGAATGGAATAACTGCTAACATCCCGGTTGTCACAATGTCTGATGAAGATAGGGATGAAATCTTGAGGAAATTCCAACAGTTTAAACAGTTTGAAACAGTTGAAGACACTTCAGACCATTACTATAATCGCAAGAGTTCTTCCTTGAAGCAGCATTCAAAGAGTTGGTCGAAGAAAATTCAGGAAGAGTGGAGGATTCTGGAGAAGGATTTACCTGATTCAATATTTGTAAGAGTTTATGAGTCAAGGTTGGATATTTTGAGAGCTGTAATTATTGGAGCAGAGGGAACTCCTTATCATGATGGTCTCTTCTTTTTTGATGTTTTCTTTCCCAGCGGCTACCCCAATGTGCCACCGGAAGTCCACTACCACTCTGGTGGTGTTAGGATCAACCCAAATTTGTATAACTGTGGCAAAGTATGCCTTAGTCTGCTTAATACTTGGTCCGGACATAAGAATGAGAAGTGGCTTCCTGGTGTTTCAACAATTCTACAGGTTCTTGTTTCTATACAAGGTTTAATCTTGAATACAAAGCCTTACTTTAATGAGCCTGGGTATGCTCATATGAGTGGTTCTGCCATGGGCGAAATGAATTCCCTGAAGTATAACGAGGACGCATTTATTCTATCATTGAAGACAATGATGTATGTGATGAGAAAGCCTCCAAAGCATTTTGAGGACTTCGTTGCAGGGCATTTCTGCAATCGGGCTCACGATATCTTGGTGGCATGTAAAGCATACATGGATGGCGCTCAAGTTGGCTGTTTGGTCAAAGGTGGAGTGCAGGATGTTGACGCAGGTGACCGGAGCTGCTCGAAGCGGTTTAAGGATACTTTAGCAGGATTTGTCAATATGCTTGTTGGAGTTTTTTCCAAAGTTGGAGCTAAGGACTGTGAGAAATTCTTGCCGCAGGCGGCAGCTGAATCTGGGAATATGCAAACAGGTTCTAACCCTGATACTGCTGCTCCTGCTACCTTGAACTCTCCCCTCTGA 2229 0.4186 MNRSIELPPLPQFSLRNSKSFSFSLKLSGVFLGSNSPLMDPDVVEISPPIHHPSKLMKQKAIISDVIDIDNDDDSADLVFIGENVGGSRKGKEMSGDICSPPTLEHFGPASGLASSSGYASVSHNVINVDGHSSDVSNDDDDYNDHFAEDIMDVDEYDMLQAHFDHVNLPAGIEAPIPWMSNFDLDLKKSESSSSNPWGNMQLDVNSSHGTDLSQLSWETGSSDYIQHTLVHSSSSLINNVAIDPPAQKLSSQLHSEAASNKKQSSPSQVDGLKMNLNLAPGADSSLHHWFKGPSSRNKKLSMLNELHYDALAHKSESLKLLPGGEPPYWAKAKSAKAYGKDAQFHSNFFPPFEGPHHFLEPSNTNMWKIPPNLPFTDHSDNLGFYYPFDPLDGPLPPMMGNTWFHNNASDEKNGITANIPVVTMSDEDRDEILRKFQQFKQFETVEDTSDHYYNRKSSSLKQHSKSWSKKIQEEWRILEKDLPDSIFVRVYESRLDILRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPEVHYHSGGVRINPNLYNCGKVCLSLLNTWSGHKNEKWLPGVSTILQVLVSIQGLILNTKPYFNEPGYAHMSGSAMGEMNSLKYNEDAFILSLKTMMYVMRKPPKHFEDFVAGHFCNRAHDILVACKAYMDGAQVGCLVKGGVQDVDAGDRSCSKRFKDTLAGFVNMLVGVFSKVGAKDCEKFLPQAAAESGNMQTGSNPDTAAPATLNSPL 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1017 742 Gene3D Ubiquitin Conjugating Enzyme 426 700 IPR016135 -
Mibi07g1017 742 SMART ubc_7 470 627 - -
Mibi07g1017 742 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 467 627 IPR000608 -
Mibi07g1017 742 SUPERFAMILY UBC-like 456 636 IPR016135 -
Mibi07g1017 742 CDD UBCc 469 620 IPR000608 -
Mibi07g1017 742 MobiDBLite consensus disorder prediction 250 272 - -
Mibi07g1017 742 MobiDBLite consensus disorder prediction 721 742 - -
Mibi07g1017 742 FunFam Probable ubiquitin-conjugating enzyme E2 23 430 706 - -
Mibi07g1017 742 Pfam Ubiquitin-conjugating enzyme 472 596 IPR000608 -
Mibi07g1017 742 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 424 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1017 Mibi-ChrMibi07 13974802 13980940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1017 424 717 Miscellaneous Gene Families AT2G33770 48.649 1.37e-85 288