Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0973 ATGCTGGAGCTACTCATGTGGATGCAATTTGCTTTGGCTTTTCTCCTTCTAGGCATGGTTATGGGTAATGAATCGTCATCTTCCTTATCCATACCAGTTGATAATTACTTGCTTGCTTGTGGCTCTTCTGTTAACATAACCTTTCAAGGTCGCACTTTTTTACCTGATTCTGTCTATGAGAAACATAACTTCGAATTGAAAACCCAGAAATCTGTTGTCGTTACCTCTGATTCTGGCATTCCAACTCCAATCTACCAGTCAGCTAGAATCTTTTGGAGCAATGCTTCATATATATTCAGAATTTCACAACCAGGCCAGCATTGGATTCGCCTTTACTTCTCCCCTTTGCCTAAATTTCTCCAAGAAATGTCCTCTGCCTCAATAATAGTCATCACTGATGATGTTGTGCTTATCAGTGATTTCACTTTCATCAACTATGCTGATTCTTACCTTTTCAAGGAGTATGCAATTAATATAACATCTTCCACCTTGTCTCTCACATTCATCCCTTCCAGAAATTCATTAATCTTTGTGAATGCCATTGAAGTTGTCTCTATACCTGATGATATCTTTGTTAATGTAATCAACAGTACATCACTTGATATGGAACATCATTCAGACCTGGTCCTTGAATCTGTTTACCGGTTGGATGTAGGCAGTGAATCTCCCTCCACTAGGAATGATGACCTTGGTCGAAACTGGGAAGGTGATGAAAAATACATGGCCCCCAATAGTAGAGCAATAAATATTTCAGTTGATACTTCCTCTATAAATTTTGCTTCTCAGATTGAACCTACCGTAGCTCCAATATGGGTTTATACTACAGCCAAAGTCATGGCAGATGAAACAAGACCTAATTTAACATGGGTCTTCCCTGTAAATCCAAACTATACTTATTTTGTTCGGGTGCATTTATGTGATGTCATAAGCAACTCAAAAGGTCTAGCAATCTTCAATCTATTTATAAACGATGTTGTTTATCAAGTCGACCTTTACTCCATCTTTCACAAGTTTTCAGTCCCATTTTACATGGATTCTGTTGTCTACACAAGAGAAAGTGATTTGAAAGTAAGTGTTGCTCCAGATAAAACGACAAATAGCAGAAATGCAACCATAAGTGGGCTGGAAATAATGAAGATCATCAATGAAGTTAGAACTCTGGATGAAGCCAATTCCTCAGATAGTATTCTCCCCAATTCATCCTCAAGAACTGTGAAACAAGCAATTATAGTTCGGCCTATCCTTGGAGCTGCAGCTTTCATAGTTCTCACTACAATATCATTATGTTACATAATAGCTCACAGGTCCAAGGCAAGTTCTAGATCTACCACCCCAATATCATGCAAGATTTTCACTTTACAAGAAATCAGTGAAGCAACAAACAACTTTGATGAACATCTGCTTCTTGGAGAAGGTGGTTTTGGCAAGGTCTACAAAGGAACAATGAATAATAGGAGAAAAGTAGCCATCAAAGTAGCCAATCCAGAATCAAGACAGGGTCTTCGTGAATTTCAGAATGAGATTGAATTGCTATCCAGACTTTCTCATCCGAACCTTGTCTCTCTAATAGGCTGTTGTGATGAAGACTCTCAAATGATTCTGGTCTATGAATTCTTGGCAAATGGATCTTTAAGCGGTCACCTGTATGGAACCAGCTTCATTCCTCTTTCATGGAAGAAACGACTAGAAATATGCATTGGTACTGCAAAGGGTCTTCACTTCCTTCACACAGAGGCACCTAGAAGTATAATCCACCGTGATGTTAAGACAACAAATATTCTCTTGGACAAGAATTTAGTACCAAAAGTTGCTGATTTTGGAATCTCAAGAAAAGGTCCACCTCTTGATAAGAGTCATGTAACAACCCTTGTCAAGGGCAGCTTTGGTTATCTGGATCCCGAGTATTTTAGAACAAAATATCTCACAGAGAAATCAGATGTTTTCTCATTTGGGATGGTTCTAATGGAAGTTATCTGTGGCAAACCTGCTTTAGACAACACTCGGCCAACAGAACATCTTAATTTGGCAATATGGGCATCAAGCTGTCAAGAAAAGGGAACATTTCATGAAATTATAGACTCCAATTTGATTGGTAAAGTGAACTTAGATTCTCTAAACAAGGTACGTGAGTTGGCTTGGAAGTGCTTGGAGGAGTGGCGCAAAAATAGACCACCAATGGGGTATGTACTGTGTGAGCTTGAAGATGCTCTCCATATTGAATTGGCTTCACCAATTCAGCAAGTTTCTATGGATTGTGCCATTGATGTGGTTAAAGAAAATGAAACCAAGGATGAAAAGGAACAAGAATTCGCTAAGGGTATTGTTCTCTCAGTTCAATGA 2340 0.388 MLELLMWMQFALAFLLLGMVMGNESSSSLSIPVDNYLLACGSSVNITFQGRTFLPDSVYEKHNFELKTQKSVVVTSDSGIPTPIYQSARIFWSNASYIFRISQPGQHWIRLYFSPLPKFLQEMSSASIIVITDDVVLISDFTFINYADSYLFKEYAINITSSTLSLTFIPSRNSLIFVNAIEVVSIPDDIFVNVINSTSLDMEHHSDLVLESVYRLDVGSESPSTRNDDLGRNWEGDEKYMAPNSRAINISVDTSSINFASQIEPTVAPIWVYTTAKVMADETRPNLTWVFPVNPNYTYFVRVHLCDVISNSKGLAIFNLFINDVVYQVDLYSIFHKFSVPFYMDSVVYTRESDLKVSVAPDKTTNSRNATISGLEIMKIINEVRTLDEANSSDSILPNSSSRTVKQAIIVRPILGAAAFIVLTTISLCYIIAHRSKASSRSTTPISCKIFTLQEISEATNNFDEHLLLGEGGFGKVYKGTMNNRRKVAIKVANPESRQGLREFQNEIELLSRLSHPNLVSLIGCCDEDSQMILVYEFLANGSLSGHLYGTSFIPLSWKKRLEICIGTAKGLHFLHTEAPRSIIHRDVKTTNILLDKNLVPKVADFGISRKGPPLDKSHVTTLVKGSFGYLDPEYFRTKYLTEKSDVFSFGMVLMEVICGKPALDNTRPTEHLNLAIWASSCQEKGTFHEIIDSNLIGKVNLDSLNKVRELAWKCLEEWRKNRPPMGYVLCELEDALHIELASPIQQVSMDCAIDVVKENETKDEKEQEFAKGIVLSVQ 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0973 779 CDD STKc_IRAK 469 734 - -
Mibi07g0973 779 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 279 747 - -
Mibi07g0973 779 FunFam receptor-like protein kinase FERONIA 430 538 - -
Mibi07g0973 779 SUPERFAMILY Protein kinase-like (PK-like) 438 733 IPR011009 -
Mibi07g0973 779 Gene3D Phosphorylase Kinase; domain 1 428 538 - -
Mibi07g0973 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Mibi07g0973 779 ProSiteProfiles Protein kinase domain profile. 463 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0973 779 FunFam Wall-associated receptor kinase 2 539 754 - -
Mibi07g0973 779 Pfam Malectin-like domain 39 380 IPR024788 -
Mibi07g0973 779 Gene3D - 35 186 - -
Mibi07g0973 779 Gene3D - 209 381 - -
Mibi07g0973 779 Pfam Protein tyrosine and serine/threonine kinase 468 729 IPR001245 GO:0004672|GO:0006468
Mibi07g0973 779 FunFam Putative receptor-like protein kinase 35 187 - -
Mibi07g0973 779 ProSitePatterns Protein kinases ATP-binding region signature. 469 491 IPR017441 GO:0005524
Mibi07g0973 779 Gene3D Transferase(Phosphotransferase) domain 1 539 753 - -
Mibi07g0973 779 SMART serkin_6 463 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0973 Mibi-ChrMibi07 12894906 12897245 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0973 31 742 Receptor kinase-like Gene Family AT5G59700 41.845 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi07g0973 Malectin_like 1.9e-25 CL0202