Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0963 ATGAACCAGAAGGCCAACGTTTCCAAAGAGCTCAACGCCAAGCACAAGAAGATATTGGAAGGACTTCTTAAACTGCCAGAAAATAGGGAATGTGCCGACTGCAAAGCTAAAGGTCCAAGGTGGGCTAGTGTGAACCTAGGCATCTTTATCTGCATGCAGTGTTCAGGAATACATCGAAGTCTTGGGGTACATATTTCAAAGGTTCGGTCTGCGACTCTGGACACCTGGCTTCCAGAGCAGGTTGCATTTATTCAATCTATGGGAAATGAGAAAGCTAATTCTTACTGGGAAGCAGAGCTACCTCCAAATTATGATAGAGTTGGAATCGAGAATTTTATTCGTGCAAAATATGAAGAGAAGAGATGGGTTCCGAGGGATGGAAATGTAAAATCACCTTCTAGGCAGCAGGAAGACAGGACTTCTTCAACTTTGCAGAGGCCTGCAGAAAGAAGTGGGCACGGTAATACATCTGCTTCTGAGAACACTTTTCATGAAAGGAAGAAAATTCAGGCTACAAATACCATTCCTGCAACGAGAAATAATGTTCCTGCTCCTCCAAAAGTACCTGAACAGGTAACTCCTGCAAAACCTCAGCATGTAGAGAAAGTGGAACCTGTGGCTCCAAAACTGCAAACTGAATCAACTAAACCAGCTGCTGTCATGGCTCCTAATACCGCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACTTGTTATCCATGGATACCCCAGTTGAAAATGGCTCAGAGGAAGCTAGTACTACTACTGGCGATAGTAACTGGGAAGGTTTTCAGTCCGCTGCAGAAGCATCAACAAATGAGAAGACTGGTTTCACAAAAGCAGGAGAGAGCACTCCCAAGTCTAATACTGGAATTGAGGATCTATTTAAGGATTCACCTTCAGTGACTCCTTTAGTTCCAGTAAAACCTCAGAAAGATTTGAAGAATGATATCATGAGCCTGTTTGAGAAGTCCAACATGGTCTCTCCATTTTCTGCGCACCAGCAACAGCTTGCCATGCTTGCGCAGCAACAGTCCCTTCTAATGGCTGCTTCAGCTAACTCTGCTGGTGGAAATGTCAAGTATCCTGGTAGTATACAACAACCTGGACTGAATGGATCCAATATACCTGTCCCAAGTTGGCCAGCTGCCGGTTACCCAGTTCCTGGAGTAATGCCCATGGCTGGTCAGGGAGAGCTGCAGAAATTAATGCAGACTAGGAGCACGACTCCAGCTCGTCCAGTGTTGAATTCTGTGCAGTATCCAACATCTAGTTTCTATATGATGGGATCAGTTAGACCCGTTAATGGTGTCACGACGAGAGGAGTGAGTAAAGCTCCGCCTCCAGCTTCAATGCCATCCTCAGCCTCCTCACAGGCACCAAAGGACTTTGATTTCTCCTCTTTAACGCAAGGGATGTTTACCAAACCCTGA 1434 0.4533 MNQKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWVPRDGNVKSPSRQQEDRTSSTLQRPAERSGHGNTSASENTFHERKKIQATNTIPATRNNVPAPPKVPEQVTPAKPQHVEKVEPVAPKLQTESTKPAAVMAPNTAPKVDYATDLFNLLSMDTPVENGSEEASTTTGDSNWEGFQSAAEASTNEKTGFTKAGESTPKSNTGIEDLFKDSPSVTPLVPVKPQKDLKNDIMSLFEKSNMVSPFSAHQQQLAMLAQQQSLLMAASANSAGGNVKYPGSIQQPGLNGSNIPVPSWPAAGYPVPGVMPMAGQGELQKLMQTRSTTPARPVLNSVQYPTSSFYMMGSVRPVNGVTTRGVSKAPPPASMPSSASSQAPKDFDFSSLTQGMFTKP 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0963 477 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Mibi07g0963 477 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Mibi07g0963 477 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Mibi07g0963 477 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Mibi07g0963 477 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Mibi07g0963 477 CDD ArfGap 19 117 - -
Mibi07g0963 477 MobiDBLite consensus disorder prediction 134 159 - -
Mibi07g0963 477 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Mibi07g0963 477 MobiDBLite consensus disorder prediction 267 298 - -
Mibi07g0963 477 MobiDBLite consensus disorder prediction 124 195 - -
Mibi07g0963 477 MobiDBLite consensus disorder prediction 267 296 - -
Mibi07g0963 477 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Mibi07g0963 477 MobiDBLite consensus disorder prediction 438 477 - -
Mibi07g0963 477 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Mibi07g0963 477 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Mibi07g0963 477 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 476 IPR044520 GO:0005096
Mibi07g0963 477 MobiDBLite consensus disorder prediction 450 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0963 Mibi-ChrMibi07 12813265 12819666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0963 16 165 C2H2 Transcription Factor Family AT4G05330 42.500 1.84e-30 119