Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0927 ATGAGGTTTGGGGGACAAGACATCTATGTACGTGTTCCTGCTTCAGAGCTAGATCATATCGGGAATGAAGGACATGGGGGCATTGGCAAGAAGAAACTAGCAGGAATTGTAGTTAGCTCTGTAGTCACTATCTTCATAATTTTTGGATTGATTTTATTCAGAAGGAAAAGGAAACTTAAAAAGACAGAGAAGGAAGTCATGAATCTACCTACATTTGATCTATCAGTCATAGCTAAAGCTACCGCTAGTTTTTCAGTCATTAACAAGTTGGGAGAAGGTGGCTTTGGACCAGTATATAAGGGTACACTAGAAGATGGGAAAGAGGTAGCTGTGAAAAGGTTGTCTACGAAATCTGGTCAAGGGTTGGGTGAGTTGAAAAATGAAGTTGTGTTGATTGCAAACCTACAGCACCGCAATCTTGTGAAGCTTCTTGGTTGCTGCGTTGAAGAAGAAGAAAAATTGTTGATTTATGAATATATGCCAAACAAGAGCTTGGACCAGTTTATTTTTGACGAATCTCAAAGCAGCTTGTTGGATTGGATTAAGCGTTGGCATATTATTCATGGCATTGCTCGAGGACTTGTTTATCTTCATATAGATTCTAGATTGAGAATTATTCATAGAGATCTTAAAACCAGCAATATTCTTCTAGATGATTACATGAATCCGAAAATTTCAGACTTTGGCCTAGCTCGCACGTTTTGGGATGATCAAGTTGATGCTAACACTAACAAAGTCGTAGGGACATATGGATATATGCCTCCTGAATATGCTGTGCATGGACAATTTTCAACGAAATCCGACATCTTTAGCTTTGGAGTAATAGTGCTAGAGATTATTAGTGGGAAGAAAAATAGAGGATTTGCAGATCTAGAATACCACCTTAATCTTCTTGGACATGCAAGTCTAATTCAAAGCAGCTTGTTGATAGGCATGGAGACTTTGGATCCAAGGAAGACCAATGGAACTATTGGATGA 978 0.3875 MRFGGQDIYVRVPASELDHIGNEGHGGIGKKKLAGIVVSSVVTIFIIFGLILFRRKRKLKKTEKEVMNLPTFDLSVIAKATASFSVINKLGEGGFGPVYKGTLEDGKEVAVKRLSTKSGQGLGELKNEVVLIANLQHRNLVKLLGCCVEEEEKLLIYEYMPNKSLDQFIFDESQSSLLDWIKRWHIIHGIARGLVYLHIDSRLRIIHRDLKTSNILLDDYMNPKISDFGLARTFWDDQVDANTNKVVGTYGYMPPEYAVHGQFSTKSDIFSFGVIVLEIISGKKNRGFADLEYHLNLLGHASLIQSSLLIGMETLDPRKTNGTIG 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0927 325 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Mibi07g0927 325 SMART serkin_6 84 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0927 325 Gene3D Phosphorylase Kinase; domain 1 50 159 - -
Mibi07g0927 325 Pfam Protein tyrosine and serine/threonine kinase 86 284 IPR001245 GO:0004672|GO:0006468
Mibi07g0927 325 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 51 159 - -
Mibi07g0927 325 ProSiteProfiles Protein kinase domain profile. 84 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0927 325 Gene3D Transferase(Phosphotransferase) domain 1 160 316 - -
Mibi07g0927 325 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 301 - -
Mibi07g0927 325 SUPERFAMILY Protein kinase-like (PK-like) 63 291 IPR011009 -
Mibi07g0927 325 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 160 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0927 Mibi-ChrMibi07 12313721 12317751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0927 14 302 Receptor kinase-like Gene Family AT4G23190 54.667 1.29e-107 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi07g0927 PK_Tyr_Ser-Thr 9.6e-46 CL0016