Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0904 ATGGACCCACTCTGTTTCATAAGCTTCGTTGCTTATGTTCTTGTCTCTGGTTTCAAATCTTCCTTGGCAGTTAGCTCCATTCTTCAATCCCAAAACCTCAGTGACGTCTCGAGAACAATCTTAACTTCCCAAGGTGGAAACTTTGAGCTGGGTTTCTTCTCCCCAGGAAACTCCGACAAACGCTACCTTGGAATTTGGTACAACAAAATCCCACAAACTGTTGTCTGGGTAGCAAACAGCATCAACCCAACTAACGATTCATCCGGCGTGTTAACGGTCAACGCCACAGGCAACCTAGTACTCACACAAAACAACACCGTCGTTTGGTACACGAATTTAACAAGTCAGGCTCAGAATCCAGTGGCAGAGCTCTTAGATTCTGGGAATTTTGTGGTGAGAGATGGAAATGAAGCAAACCCAGAAGTTTATTTGTGGCAAAGTTTTGATTTTCCTTCTGATACATCACTTCCTGGTATGAAGCTAGGATGGGACCTGAAAAATCATCTGAATAGGAAAATAACAGCTTGGAATAGCCCAGATGATCCATCCCCAAGTGGGTTTTCTTGGGAATTATTGCTTCATAACTATCCTGAGTTTTTTCTTATGAAGGGATCAAAGAAGTACATGAGAATTGGACCTTGGAATGGTTTATATTTTAGTGGAATACCAGATTTAAAGCCAAACCCAATTTATGACTTCAACTTTATATCCACTTCGGATGAGGTTTACTATACTTATAGCCTCAATAACACTTCTGTGATATCTAGGTTGGCTGTGAACCAAACCACTTCTCAGGCCAATCGTTATGTGTGGGTTGAATCAGATAAAAGTTGGATGATTTATCAGTCACTTCCTAAGGATTATTGTGATAACTATAATCTTTGTGGACCAAATGGGAATTGTATTATCAGTGATTCACCTGTTTGCCAATGCTTGAAAGGGTTCAAGCCTAAGATACCACAAGCTTGGAACTCAATGGATTGGTCAGGAGGGTGTGATAGAAATGAGGCATTGAGCTGTAATAATACTGGAAGCAGTACGGATGGGTTTATCAGATTGACTGAGTTGAAAGTGCCAGAAACTGAAAATAGTTGGATAGATCAGAGTATGAGTTTAGAAAGATGCAGAGAGAGGTGCCTGAGTAATTGTTCTTGCATGGCCTATACAAGTTCAAATATATCAGGAGCAGGAAGTGGCTGTGTCATGTGGTTTGGAGATTTAATTGACATCAGAAACTTTCCTTCTGATGGGCAGGATCTGTATATTCGAATGGCTGCTTCGGAGCTAGGGGAAGAACGTAGGAGCAAGAAGAAGCTGACAATAATTATTGTATCAACCTTGGGTGCAATTTCCCTGGTGCTTTTACTTGGCTTTTGTTGTTATATCTACCGAGACCGGAAGAGGACGAGGAAGATGACTGACAATCCAAATGACAATGAAGGAGATCAAAACAGGGGAGAAAGGGTAGATGATCTGGATCTCCCACTGCTTGACTTTTCAATAATAGCTGTTGCCACTGATAACTTCTCATCAGAGAACAAGATTGGTGAAGGAGGTTTCGGACCTGTTTATAGGGGAAAATTAGCACAAGGGCAAGAGATTGCTGTTAAGAGGCTTTCAGGAAGCTCAAGGCAAGGAACAACTGAGTTCAAGAATGAAGTAAAATTGATAGCAAAACTCCAACACAGGAATCTTGTGAAACTCTTTGGTTGTTGCATCCAAGGAGATAACAAAATGCTGGTGTATGAATACATGCCTAATTCCAGCTTGGATTGTTTCATTTTTGATGATATCAAAAGTAAATGGCTAGACTGGCCTAAACGTTTCCACATTATTTGTGGAATTGCGCGGGGTCTTGTTTACCTACATCAAGATTCTAGATTGAGAATTATTCATCGAGATCTCAAACCAAGTAATGTTTTACTTGATGACAAGTTAAACCCAAAGATATCAGATTTTGGTATAGCTAGAATCTTTGGAGGAGACCAAATAGAAGGAAACACAAAGCGAGTAGTTGGCACTTATGGGTATATGGCACCGGAGTACGCTGCCGATGGTCTTTTTTCCGTGAAGTCCGATGTTTTCAGTTTTGGGATATTATTATTAGAGATTATTAGTGGGAAGAGAAGTAGAGGCTTCTATAATCCAGACCGCTCCCACAACCTTATTGGCTATGCTTGGAATCTGTGGAAAGAAGGAAGTGCAACAGAATTAATAGACTCAAACTTAGTGGAATCATGCAATTTATCAAAATTACTTCGTTGTATTCATGTTGGACTCTTGTGTGTTCAACAATATCCAGAGGATAGGCCTACAATGTCATCTGTGGTTCTAATGTTAGGAAGTGAAACTGAATTGGCTCAACCTAAAGTTCCTGGTTTCTATACAGAGAAGGATTTCACTGAAACTAATTCACAAACAAGTCAAATGGAAGGTAGCTCCACTAACGAATTAACCATAACTCTATTAGAAGCTCGATGA 2481 0.4023 MDPLCFISFVAYVLVSGFKSSLAVSSILQSQNLSDVSRTILTSQGGNFELGFFSPGNSDKRYLGIWYNKIPQTVVWVANSINPTNDSSGVLTVNATGNLVLTQNNTVVWYTNLTSQAQNPVAELLDSGNFVVRDGNEANPEVYLWQSFDFPSDTSLPGMKLGWDLKNHLNRKITAWNSPDDPSPSGFSWELLLHNYPEFFLMKGSKKYMRIGPWNGLYFSGIPDLKPNPIYDFNFISTSDEVYYTYSLNNTSVISRLAVNQTTSQANRYVWVESDKSWMIYQSLPKDYCDNYNLCGPNGNCIISDSPVCQCLKGFKPKIPQAWNSMDWSGGCDRNEALSCNNTGSSTDGFIRLTELKVPETENSWIDQSMSLERCRERCLSNCSCMAYTSSNISGAGSGCVMWFGDLIDIRNFPSDGQDLYIRMAASELGEERRSKKKLTIIIVSTLGAISLVLLLGFCCYIYRDRKRTRKMTDNPNDNEGDQNRGERVDDLDLPLLDFSIIAVATDNFSSENKIGEGGFGPVYRGKLAQGQEIAVKRLSGSSRQGTTEFKNEVKLIAKLQHRNLVKLFGCCIQGDNKMLVYEYMPNSSLDCFIFDDIKSKWLDWPKRFHIICGIARGLVYLHQDSRLRIIHRDLKPSNVLLDDKLNPKISDFGIARIFGGDQIEGNTKRVVGTYGYMAPEYAADGLFSVKSDVFSFGILLLEIISGKRSRGFYNPDRSHNLIGYAWNLWKEGSATELIDSNLVESCNLSKLLRCIHVGLLCVQQYPEDRPTMSSVVLMLGSETELAQPKVPGFYTEKDFTETNSQTSQMEGSSTNELTITLLEAR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0904 826 SMART ntp_6 345 424 IPR003609 -
Mibi07g0904 826 ProSiteProfiles PAN/Apple domain profile. 340 425 IPR003609 -
Mibi07g0904 826 SUPERFAMILY Protein kinase-like (PK-like) 495 780 IPR011009 -
Mibi07g0904 826 Pfam Protein tyrosine and serine/threonine kinase 512 778 IPR001245 GO:0004672|GO:0006468
Mibi07g0904 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Mibi07g0904 826 Gene3D Transferase(Phosphotransferase) domain 1 585 792 - -
Mibi07g0904 826 SMART blect_4 31 151 IPR001480 -
Mibi07g0904 826 PIRSF SRK 1 826 IPR024171 GO:0004674
Mibi07g0904 826 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Mibi07g0904 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Mibi07g0904 826 Pfam Domain of unknown function (DUF3403) 783 826 IPR021820 GO:0004674
Mibi07g0904 826 Pfam PAN-like domain 344 410 IPR003609 -
Mibi07g0904 826 Gene3D - 21 148 IPR036426 -
Mibi07g0904 826 Gene3D Phosphorylase Kinase; domain 1 476 584 - -
Mibi07g0904 826 CDD PAN_AP_plant 338 425 - -
Mibi07g0904 826 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 771 - -
Mibi07g0904 826 ProSiteProfiles Protein kinase domain profile. 509 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0904 826 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Mibi07g0904 826 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Mibi07g0904 826 CDD B_lectin 32 151 IPR001480 -
Mibi07g0904 826 SMART serkin_6 509 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0904 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 584 - -
Mibi07g0904 826 CDD STKc_IRAK 515 780 - -
Mibi07g0904 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Mibi07g0904 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 585 788 - -
Mibi07g0904 826 Pfam D-mannose binding lectin 73 176 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0904 Mibi-ChrMibi07 11793902 11797375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0904 439 794 Receptor kinase-like Gene Family AT4G23230 54.062 3.90e-130 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi07g0904 PK_Tyr_Ser-Thr 5.7e-47 CL0016