Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0901 ATGGCGGATGATCAATTTCAAGCAACTGCGAATTGGTGGGACTCATCTTCTTCAAGAACCACTGCTCCTTCACAACACTCATCTTCCTCCTTCCCCAACTTCACTTGGAACTTAGATCATCACGACCTCAAACCAACCTCTTCCATCTCTGATTCTCCCACTTCCACTCACCCAAACTCGCACATGGTCATGCCTCCTTGGAACAATAATACTAATACTCAACCCCCTCATCATCATCTTAATCTCCTAGAAGAGAAAGGGGTGTCTGATGGGCGATTCAGAACCATGTTTCAGGAGAATAATTTTCATAGTCACAATAATAATCAGCATCAAGTTGAGTGGAGAGAGAAGCTTTTGTTTTCTACAGAATCTTCTTCAACTTCTGGGGATAGTATAGTGACCACAAGCCAAGGCTTAGCTAATAGTTCTAACTTCCACATGGATTCTAATAATTCCTATTCTGCCCCTCCAAATCCTTCAATATTATTGCAAGGATTATTAGCACCTGAAGCTTCCTCCTCCTCCTCCTCCTTTGACAATAACCATAATCGCTCTTCTTGCTTCAATAACTTTCCCTATGCTTCTGCCTTGAGTTCTAATAATAGTGATCAGTTGATGGCTTCTCAGTTTCTTAGGGCTTCGCCTCCCAAACAAACACCACATCATGGTGGTGGTGGTGGTAATAGGCAATTGCAATTTACAAACAACACAACCTTCTGGAATGCTTCTGAAGCTCATCATCATCAACATCACGCTGCCATTAAAGAGGCTCGACCTTCTTGCTTCTTCCCTAATTCTTTGCAGCCTCCTTTTCACTCCCCAAATTTTGATGCACAATCAAAGAATATTTGTGGAGGAAGAGAAACAAGCAGTGTGGGGAAGAAAAGTGGTGGAGAGACGGCACCAAAAAGGGCTAGAAACGAAACCTCATCAACTTTGCCACCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACCGTATTACTGCTCTCCAACAGCTGGTTTCTCCTTTTGGGAAGACTGATACAGCCTCAGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCACGAACAAGTCTCTGTTTTAAGCACCCCATACATGAAAAGTGGAGCTCCATTACAGCACCAACAGAGTTCTGGTAAATGTAAGGAAAGTGAAGCCCTAAAACAAGACCTGAGAAGCCGAGGGTTGTGTTTGGTGCCAGTTTCAAGTACTTTCCCAGTGACTCATGAAACCACTGTTGATTTTTGGATGCCAACTTTTGGAGCCACTTTCAGATAA 1284 0.4315 MADDQFQATANWWDSSSSRTTAPSQHSSSSFPNFTWNLDHHDLKPTSSISDSPTSTHPNSHMVMPPWNNNTNTQPPHHHLNLLEEKGVSDGRFRTMFQENNFHSHNNNQHQVEWREKLLFSTESSSTSGDSIVTTSQGLANSSNFHMDSNNSYSAPPNPSILLQGLLAPEASSSSSSFDNNHNRSSCFNNFPYASALSSNNSDQLMASQFLRASPPKQTPHHGGGGGNRQLQFTNNTTFWNASEAHHHQHHAAIKEARPSCFFPNSLQPPFHSPNFDAQSKNICGGRETSSVGKKSGGETAPKRARNETSSTLPPFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYMKSGAPLQHQQSSGKCKESEALKQDLRSRGLCLVPVSSTFPVTHETTVDFWMPTFGATFR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0901 427 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 317 372 IPR036638 GO:0046983
Mibi07g0901 427 CDD bHLH_AtbHLH_like 313 364 IPR045239 -
Mibi07g0901 427 MobiDBLite consensus disorder prediction 1 30 - -
Mibi07g0901 427 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 111 408 - -
Mibi07g0901 427 MobiDBLite consensus disorder prediction 45 78 - -
Mibi07g0901 427 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 307 356 IPR011598 GO:0046983
Mibi07g0901 427 FunFam Transcription factor bHLH123 family 317 379 - -
Mibi07g0901 427 SMART finulus 318 362 IPR011598 GO:0046983
Mibi07g0901 427 Gene3D - 317 381 IPR036638 GO:0046983
Mibi07g0901 427 MobiDBLite consensus disorder prediction 284 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0901 Mibi-ChrMibi07 11749775 11753102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0901 231 427 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 63.184 2.45e-70 225