Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0900 ATGGATCTTCTGTGCGATGCATACGGCAATGCTTCTGACGATGATAATACTAATGAAGATCAACCTAAACGTCAGAAACTCTCACCTTCTTCTTCTTCTTCTTCTTCTTCCATCTCTCCAAAACCCTATTTTCCTCCTCCTACGAATCACTATTCGCAGCTCCAATCGCAATCTTCGCTTCCTGGTAGATATGTCTCTAAGAGACAAAGGGCTCTTTTAAGTGTTAATCCCATTGTTTCTGACCCAGCTCCGCCTATGGTCTCGCCTTCTGTTAATTTATCTGGAAGCATCTCGGATACCAATCTACCTCCTAGCATTTTATCACTTTTGAGAAATAAAGCTAGAGGTCATCAAAATTTGAACCTGGTACCTGAAAGGCTATCTGTGGCTCTATCTGGCCATACAAAAGCTGTCAGTGCTATACAATGGTCTCCCACTTATGCTCATCTCCTTGCATCTGCCGGGATGGACCATTTGGTTTGCGTTTGGAATGTATGGAGTAGAGATCAAAAGAAAACACGTGTAATAAATTTCCACAATGCAGCAGTGAAAGATGTGAAATGGTCTCAGCAAGGGCACTCTCTGCTTTCTTGTGGATATGATTGTAAATCCAGGTTGATTGATGTAGAAAAGGGGTTTGAGACTCAGGTTTTCAGTGAAGATCAAATCGTTGGAGTTATAAAGTTTCACCCAGACAACTCAAACCTCTTTCTTTCTGGTGGTTCAAAGGGCCATATTAGATTATGGGATATCAGGACTGGCAAAACAGTCCATAGCTTTAATCGTAGTTTAGGTCCGATTTTGGATGTTGAGTTTACAAGCAGTGGGAAGCAGTTCATTTCTTCTAGTGATGTATCTGGGAGTAATGTCAGTGAGAACTCAATTATTGTTTGGGATGTGTCCAGACAGGTTCCGCTGTCTAGTCAGGTTTATGTTGAAGCTTATACCTGTCCATGTGTAAGGCGCCACCCATTTGAGTCTACCTTCGTTGCCCAGTCAAATGGAAATTACATTGCAATTTTTACATCCAACCCCCCTTTCAGGCTAAACAAATACAAGAGGTATGAAGGCCATGGGGTCTCTGGGTTCCCCATAAAGTGCAATTTCAGTTTGGATGGGAAGAGGCTTGCTTCTGGTTCTTCAGATGGTTATATTTTTCTTTACGATTATCACTCATCCAACATTGTTGAGAAAATCAAGATCTCTGAACAAGCATGCATAGATGTTGTTTTCCATCCTGTTATACCTAATGTTATAGCTTCATGCTCCTGGGATGGAAGCATTTCAATATTTGAATAG 1299 0.4134 MDLLCDAYGNASDDDNTNEDQPKRQKLSPSSSSSSSSISPKPYFPPPTNHYSQLQSQSSLPGRYVSKRQRALLSVNPIVSDPAPPMVSPSVNLSGSISDTNLPPSILSLLRNKARGHQNLNLVPERLSVALSGHTKAVSAIQWSPTYAHLLASAGMDHLVCVWNVWSRDQKKTRVINFHNAAVKDVKWSQQGHSLLSCGYDCKSRLIDVEKGFETQVFSEDQIVGVIKFHPDNSNLFLSGGSKGHIRLWDIRTGKTVHSFNRSLGPILDVEFTSSGKQFISSSDVSGSNVSENSIIVWDVSRQVPLSSQVYVEAYTCPCVRRHPFESTFVAQSNGNYIAIFTSNPPFRLNKYKRYEGHGVSGFPIKCNFSLDGKRLASGSSDGYIFLYDYHSSNIVEKIKISEQACIDVVFHPVIPNVIASCSWDGSISIFE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0900 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 131 173 IPR001680 GO:0005515
Mibi07g0900 432 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 131 165 - -
Mibi07g0900 432 MobiDBLite consensus disorder prediction 23 39 - -
Mibi07g0900 432 MobiDBLite consensus disorder prediction 1 60 - -
Mibi07g0900 432 ProSitePatterns Trp-Asp (WD) repeats signature. 151 165 IPR019775 -
Mibi07g0900 432 SUPERFAMILY WD40 repeat-like 122 431 IPR036322 GO:0005515
Mibi07g0900 432 Gene3D - 111 432 IPR015943 GO:0005515
Mibi07g0900 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 217 259 IPR001680 GO:0005515
Mibi07g0900 432 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 217 255 - -
Mibi07g0900 432 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 432 - -
Mibi07g0900 432 Pfam WD domain, G-beta repeat 353 389 IPR001680 GO:0005515
Mibi07g0900 432 Pfam WD domain, G-beta repeat 227 250 IPR001680 GO:0005515
Mibi07g0900 432 Pfam WD domain, G-beta repeat 131 164 IPR001680 GO:0005515
Mibi07g0900 432 Pfam WD domain, G-beta repeat 172 206 IPR001680 GO:0005515
Mibi07g0900 432 SMART WD40_4 253 299 IPR001680 GO:0005515
Mibi07g0900 432 SMART WD40_4 348 389 IPR001680 GO:0005515
Mibi07g0900 432 SMART WD40_4 211 250 IPR001680 GO:0005515
Mibi07g0900 432 SMART WD40_4 169 208 IPR001680 GO:0005515
Mibi07g0900 432 SMART WD40_4 124 164 IPR001680 GO:0005515
Mibi07g0900 432 SMART WD40_4 392 432 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0900 207 413 Miscellaneous Gene Families AT5G08390 21.635 3.03e-06 47.8